Protein Concepts Dictionary

Tableau information

Concept source:  d4fjsa_  amino acid (a.a.) range (LYS224)(GLY320)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS224)  (LEU235) H1
	  (ALA257)  (ASN269) E2
	  (ASN269)  (SER274) H3
	  (SER275)  (ILE293) H4
	  (GLN307)  (GLY320) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2       97.4°   E2                          
H3      109.4°  -33.8°   H3                   
H4     -152.5°  106.1°   98.1°   H4            
H5      -68.8° -106.9° -140.6°  -90.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2xcma_ :    (HIS-1)   (LEU58)   [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
 d4h8ab_ :   (ASP254)  (LYS315)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 562]
 d4fjsb_ :   (PRO223)  (ALA317)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d1xrha_ :   (ASP256)  (GLY322)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
 d1xrhg_ :   (LYS226)  (VAL320)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
 d1xrhd_ :   (GLY224)  (GLY322)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
 d1z2ia_ :   (GLY265)  (GLU329)   [view usage] : c.122.1.0 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 358]
 d3egwb_ :   (ASN451)  (SER487)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
 d4fjsa_ :   (LYS224)  (GLY320)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d4fjub_ :   (ASP254)  (LYS315)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d1xrhf_ :   (PRO225)  (ALA319)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58,   d.122,   c.122