Tableau information
Concept source: d4egja1 amino acid (a.a.) range (ALA55)(THR91)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA55) (GLY61) H1
(VAL63) (ALA68) E2
(GLY71) (ASN76) H3
(GLY77) (GLY87) H4
(GLY87) (THR91) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 135.7° E2
H3 -63.2° -130.5° H3
H4 -34.2° -169.7° -52.2° H4
E5 103.7° -34.5° -110.7° -136.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3hv1a_ : (GLN36) (ALA89) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus thermophilus [TaxId: 264199]
d1rh9a1 : (ILE68) (LEU131) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-mannanase |Tomato (Lycopersicon esculentum) [TaxId: 4081]
d1tiwa2 : (TYR350) (GLN404) [view usage] : c.1.23.2 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Proline dehydrohenase domain of bifunctional PutA protein |Proline dehydrohenase domain of bifunctional PutA protein |Escherichia coli [TaxId: 562]
d4eg0a1 : (SER55) (THR91) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia ambifaria [TaxId: 398577]
d1qj5b_ : (ASP187) (GLU246) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d3lefa_ : (PRO42) (ILE90) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Artificial gene [TaxId: 32630]
d4egja1 : (ALA55) (THR91) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia xenovorans [TaxId: 266265]
d3hv1b1 : (GLN36) (ALA89) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus thermophilus [TaxId: 264199]
d4egjd1 : (ALA55) (THR91) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia xenovorans [TaxId: 266265]
d4jnya2 : (TYR350) (GLN404) [view usage] : c.1.23.2 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Proline dehydrohenase domain of bifunctional PutA protein |Proline dehydrohenase domain of bifunctional PutA protein |Escherichia coli K-12 [TaxId: 83333]
d2fb2a_ : (ALA145) (GLU195) [view usage] : c.1.28.3 |TIM beta/alpha-barrel |Radical SAM enzymes |MoCo biosynthesis proteins |Molybdenum cofactor biosynthesis protein A MoaA |Staphylococcus aureus [TaxId: 1280]
d3r23a2 : (ILE47) (SER82) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Bacillus anthracis [TaxId: 198094]
d4wt7b_ : (ASN151) (PRO206) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d2jdca1 : (LYS85) (GLY127) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase YitI |Bacillus licheniformis [TaxId: 1402]
d1ex1a1 : (PRO121) (ALA205) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-D-glucan exohydrolase, N-terminal domain |Barley (Hordeum vulgare) [TaxId: 4513]
d2qwqa2 : (ASP327) (ILE363) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
d4pmub_ : (SER24) (ASN66) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1w93a2 : (VAL131) (GLY174) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Acetyl-CoA carboxylase, BC-N subdomain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2aytb1 : (ASN4) (SER66) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d1dtya_ : (ASP187) (GLU246) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d1a9xa2 : (HIS1000) (THR1043) [view usage] : c.24.1.1 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain |Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain |Escherichia coli [TaxId: 562]
d2h59a_ : (ASP169) (ASN214) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |NAD-dependent deacetylase NpdA |Thermotoga maritima [TaxId: 2336]
d1s07a_ : (GLU188) (GLU246) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d4qyxa_ : (ASN95) (VAL137) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2y8ua_ : (SER178) (THR223) [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Emericella nidulans [TaxId: 162425]
d1yzfa1 : (THR87) (ASP148) [view usage] : c.23.10.5 |Flavodoxin-like |SGNH hydrolase |TAP-like |Lipase/acylhydrolase |Enterococcus faecalis [TaxId: 1351]
d3a6ke_ : (ASP91) (SER152) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d2d26a1 : (PRO88) (THR144) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Antitrypsin, alpha-1 |Human (Homo sapiens) [TaxId: 9606]
d4f3sa_ : (SER4) (GLU54) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d2amxa1 : (SER273) (VAL320) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Plasmodium yoelii [TaxId: 5861]
d4coba_ : (PRO129) (GLY174) [view usage] : c.8.8.0 |The "swivelling" beta/beta/alpha domain |Putative cyclase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4egqa1 : (ALA55) (THR91) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1iova1 : (GLN49) (THR84) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Escherichia coli, gene ddlB [TaxId: 562]
d2y8ub_ : (THR177) (THR223) [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Emericella nidulans [TaxId: 162425]
d2kyra_ : (ALA52) (THR84) [view usage] : c.44.2.0 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3l49a_ : (ASN133) (PRO188) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d4jeia_ : (ILE140) (GLY188) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Yarrowia lipolytica [TaxId: 4952]
d1ltka_ : (ASN142) (SER185) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1kepa_ : (ASP65) (SER124) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-glucose 4,6-dehydratase (RmlB) |Streptococcus suis, serotype 2 [TaxId: 1307]
d4egqb1 : (ALA55) (THR91) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1zxof2 : (MSE215) (LYS263) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |Hypothetical protein BT3618 |Bacteroides thetaiotaomicron [TaxId: 818]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, c.94, c.2, c.6, c.93, c.23, c.47, c.55, c.86, c.31, d.108, c.8, c.24, e.1, c.125, c.30, c.44