Tableau information
Concept source: d2bhza3 amino acid (a.a.) range (VAL256)(GLU308)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL256) (HIS268) H1
(ASP270) (ALA276) E2
(ALA276) (THR281) H3
(HIS287) (GLU298) H4
(THR302) (GLU308) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 149.3° E2
H3 -140.9° 67.2° H3
H4 -29.4° 169.3° 111.7° H4
E5 131.6° -17.8° -84.6° 157.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3vika_ : (GLY381) (ALA443) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Neotermes koshunensis [TaxId: 60586]
d1jgia2 : (HIS332) (TYR388) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylosucrase |Neisseria polysaccharea [TaxId: 489]
d1wq3a_ : (SER169) (LYS230) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Escherichia coli [TaxId: 316407]
d3voga_ : (GLY234) (ASN291) [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
d1wdpa_ : (SER3) (TRP55) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Soybean (Glycine max) [TaxId: 3847]
d1wdqa1 : (SER5) (TRP55) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Soybean (Glycine max) [TaxId: 3847]
d4nu7c_ : (GLN82) (LYS125) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
d2y40b_ : (LYS159) (TYR215) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
d1frba_ : (GLN68) (ILE109) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |FR-1 (fibroblast growth factor-induced) protein |Mouse (Mus musculus) [TaxId: 10090]
d3vija_ : (GLY381) (ALA443) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Neotermes koshunensis [TaxId: 60586]
d3edea2 : (PRO286) (GLU340) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Flavobacterium sp. [TaxId: 197856]
d1jiba3 : (ASN300) (ILE355) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
d4qp0a_ : (PHE241) (MET291) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d1j0ha3 : (TRP316) (GLU357) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Neopullulanase, central domain |Bacillus stearothermophilus [TaxId: 1422]
d1tjra1 : (PRO88) (VAL137) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Maize (Zea mays) [TaxId: 4577]
d3zvia2 : (GLU209) (GLY274) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Clostridium tetanomorphum [TaxId: 1553]
d1krma_ : (CYS72) (MET152) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Cow (Bos taurus) [TaxId: 9913]
d4hhha2 : (ILE155) (ASP203) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |automated matches |Pea (Pisum sativum) [TaxId: 3888]
d1q85a2 : (PRO43) (PRO108) [view usage] : c.1.26.1 |TIM beta/alpha-barrel |Homocysteine S-methyltransferase |Homocysteine S-methyltransferase |Cobalamin-dependent methionine synthase MetH, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d4czla2 : (LEU281) (VAL316) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d1wdsa1 : (SER5) (TRP55) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Soybean (Glycine max) [TaxId: 3847]
d1ht6a2 : (VAL27) (ASN92) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d1kkoa1 : (GLU209) (GLY274) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |beta-Methylaspartase |Citrobacter amalonaticus [TaxId: 35703]
d1h3ga3 : (PRO286) (GLU340) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclomaltodextrinase, central domain |Flavobacterium sp. 92 [TaxId: 197856]
d3voja_ : (GLY234) (ASN291) [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
d1fp4b_ : (GLY127) (HIS185) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Azotobacter vinelandii [TaxId: 354]
d3ziza_ : (ASP225) (SER281) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Podospora anserina [TaxId: 5145]
d1q7ma2 : (PRO43) (PRO108) [view usage] : c.1.26.1 |TIM beta/alpha-barrel |Homocysteine S-methyltransferase |Homocysteine S-methyltransferase |Cobalamin-dependent methionine synthase MetH, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d1baga2 : (ASN151) (GLY207) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus subtilis [TaxId: 1423]
d4jj9c_ : (TYR-3) (PRO52) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 257310]
d4flqa1 : (HIS332) (TYR388) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
d1miob_ : (GLY81) (TYR142) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Clostridium pasteurianum [TaxId: 1501]
d3edda2 : (PRO286) (GLN340) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Flavobacterium sp. [TaxId: 197856]
d2i14a1 : (GLN111) (GLY161) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Nicotinate-nucleotide pyrophosphorylase PF1904 |Pyrococcus furiosus [TaxId: 2261]
d1czan4 : (THR812) (LEU892) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d3ueqa1 : (HIS332) (TYR388) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
d2amxa1 : (TYR115) (SER184) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Plasmodium yoelii [TaxId: 5861]
d2e18a_ : (ARG100) (ILE153) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d4lx4b_ : (LYS41) (MET98) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Pseudomonas stutzeri [TaxId: 379731]
d3n9sa_ : (PHE27) (LEU81) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Helicobacter pylori [TaxId: 290847]
d3vgea2 : (SER226) (ALA282) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Glycosyltrehalose trehalohydrolase, central domain |Sulfolobus solfataricus, km1 [TaxId: 2287]
d1mzoa_ : (SER647) (VAL709) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1cm5a_ : (SER647) (VAL709) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d3vgga2 : (SER226) (SER284) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Glycosyltrehalose trehalohydrolase, central domain |Sulfolobus solfataricus, km1 [TaxId: 2287]
d1v3ha_ : (SER5) (TRP55) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Soybean (Glycine max) [TaxId: 3847]
d1qhwa_ : (ARG87) (SER136) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2fgza3 : (MET653) (GLY707) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Pullulanase PulA |Klebsiella pneumoniae [TaxId: 573]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.159, c.6, c.26, c.92, c.77, c.7, c.55, d.80