Tableau information
Concept source: d1saza2 amino acid (a.a.) range (GLU268)(PRO330)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU268) (LYS293) H1
(ASP297) (GLY303) E2
(GLY303) (LYS309) H3
(LYS309) (VAL320) H4
(PRO325) (PRO330) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 141.2° E2
H3 -116.5° -97.9° H3
H4 -38.0° 156.7° -98.4° H4
E5 123.3° -20.3° -107.3° 154.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1v5ea1 : (ALA194) (THR239) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Aerococcus viridans [TaxId: 1377]
d1huxa_ : (LYS184) (PRO240) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |Hydroxyglutaryl-CoA dehydratase component A |Acidaminococcus fermentans [TaxId: 905]
d2ch5a2 : (THR42) (THR106) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |N-acetylglucosamine kinase, NAGK |Human (Homo sapiens) [TaxId: 9606]
d1x9jf2 : (ASP267) (PRO330) [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |butyrate kinase 2 |Thermotoga maritima [TaxId: 2336]
d1z05a2 : (LEU309) (GLU374) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Transcriptional regulator VC2007 |Vibrio cholerae [TaxId: 666]
d1x9jb2 : (ASP267) (PRO330) [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |butyrate kinase 2 |Thermotoga maritima [TaxId: 2336]
d1saza2 : (GLU268) (PRO330) [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |butyrate kinase 2 |Thermotoga maritima [TaxId: 2336]
d4m7xa_ : (THR188) (VAL251) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |automated matches |Staphylococcus aureus [TaxId: 196620]
d2aeua1 : (GLU157) (SER205) [view usage] : c.67.1.8 |PLP-dependent transferase-like |PLP-dependent transferases |SelA-like |Hypothetical protein MJ0158 |Methanococcus jannaschii [TaxId: 2190]
d1tr9a_ : (LEU100) (LYS160) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d1x9ja2 : (ASP267) (PRO330) [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |butyrate kinase 2 |Thermotoga maritima [TaxId: 2336]
d2cv9a1 : (ASP46) (PRO85) [view usage] : d.159.1.10 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TTHA0625-like |Hypothetical protein TTHA0625 |Thermus thermophilus [TaxId: 274]
d2oxna_ : (VAL91) (LYS160) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d2q02b_ : (PRO114) (ASP169) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Putative cytoplasmic protein STM4435 |Salmonella typhimurium [TaxId: 90371]
d1m74a3 : (THR356) (THR391) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Translocation ATPase SecA, nucleotide-binding domains |Bacillus subtilis [TaxId: 1423]
d2rd2a2 : (MET210) (SER259) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli K-12 [TaxId: 83333]
d1zbsa1 : (PRO210) (GLN268) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |Hypothetical protein PG1100 |Porphyromonas gingivalis [TaxId: 837]
d4gvfa_ : (GLU91) (HIS164) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d2uz9a2 : (SER219) (ALA278) [view usage] : c.1.9.9 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |SAH/MTA deaminase-like |Guanine deaminase |Human (Homo sapiens) [TaxId: 9606]
d1y65a_ : (GLY90) (LYS160) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-hexosaminidase NagZ |Vibrio cholerae [TaxId: 666]
d1na5a_ : (TYR252) (ASN300) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) |Human (Homo sapiens) [TaxId: 9606]
d1v5fa1 : (ALA194) (THR239) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d2d4wa2 : (ASN374) (VAL437) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cellulomonas sp. [TaxId: 40001]
d3qa3g_ : (TYR252) (ASN300) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) |Human (Homo sapiens) [TaxId: 9606]
d3d7eo2 : (GLN383) (ALA434) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d3gbda1 : (LYS313) (TYR379) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Protaminobacter rubrum [TaxId: 126825]
d3cepa_ : (THR77) (ASP130) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Salmonella typhimurium [TaxId: 90371]
d1nnea3 : (SER162) (GLU204) [view usage] : c.55.6.1 |Ribonuclease H-like motif |DNA repair protein MutS, domain II |DNA repair protein MutS, domain II |DNA repair protein MutS, domain II |Thermus aquaticus [TaxId: 271]
d4hgxb_ : (PRO115) (ASP170) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Putative cytoplasmic protein STM4435 |Salmonella typhimurium [TaxId: 90371]
d1qu3a1 : (GLN792) (ASP862) [view usage] : a.27.1.1 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Isoleucyl-tRNA synthetase (IleRS) |Staphylococcus aureus [TaxId: 1280]
d2w40a2 : (ARG375) (TYR438) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d2z06a_ : (ASP46) (PRO85) [view usage] : d.159.1.10 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TTHA0625-like |Hypothetical protein TTHA0625 |Thermus thermophilus [TaxId: 274]
d3qa3i_ : (TYR252) (ASN300) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) |Human (Homo sapiens) [TaxId: 9606]
d4nb4h_ : (PRO189) (ASN253) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Type II pantothenate kinase, CoaW |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, d.159, c.26, c.37, c.55, c.31, c.62, a.27