Tableau information
Concept source: d4dm7a_ amino acid (a.a.) range (SER102)(ASP153)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER102) (SER118) H1
(PHE123) (ASP129) E2
(ILE130) (LYS141) H3
(ASN142) (ALA147) H4
(ALA147) (ASP153) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 143.7° E2
H3 -69.8° -146.3° H3
H4 51.8° -95.1° -114.4° H4
E5 136.8° -7.3° -152.8° 87.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4k6hb_ : (MET83) (ALA132) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d1j49a1 : (ASP219) (ASP260) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-lactate dehydrogenase |Lactobacillus helveticus [TaxId: 1587]
d4lxha_ : (THR79) (GLY129) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Sphingomonas wittichii [TaxId: 392499]
d2im5a2 : (ALA228) (SER276) [view usage] : c.1.17.2 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |Monomeric nicotinate phosphoribosyltransferase C-terminal domain |Nicotinate phosphoribosyltransferase, C-terminal domain |Porphyromonas gingivalis [TaxId: 837]
d3tqsa_ : (ASP91) (MSE132) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d1ynpb_ : (GLU27) (GLY78) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Bacillus halodurans [TaxId: 272558]
d4k6gb_ : (MET83) (ALA132) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d4dgqa_ : (MET72) (SER122) [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3dqzb_ : (THR54) (ASN105) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3bdia_ : (LYS83) (ALA131) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thermoplasma acidophilum [TaxId: 273075]
d1qyra_ : (PHE97) (MET139) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |High level kasugamycin resistance protein KsgA |Escherichia coli [TaxId: 562]
d1lqaa_ : (SER28) (SER89) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Tas protein |Escherichia coli [TaxId: 562]
d2masa_ : (ALA105) (GLY153) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |Inosine-uridine nucleoside N-ribohydrolase, IU-NH |Crithidia fasciculata [TaxId: 5656]
d1woma_ : (LEU71) (GLY120) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2h1ic_ : (ASP68) (HIS127) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Bacillus cereus [TaxId: 1396]
d3t8ja_ : (ALA101) (MET147) [view usage] : c.70.1.0 |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3dqza_ : (THR54) (ASN105) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4b6ga_ : (LEU125) (SER169) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
d3b9ga_ : (GLY117) (GLY165) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d2h1ib_ : (ASP68) (HIS127) [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Carboxylesterase |Bacillus cereus [TaxId: 1396]
d4k6ha_ : (MET83) (ALA132) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d2ff2b_ : (GLY117) (GLY165) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d1azwa_ : (THR84) (GLY134) [view usage] : c.69.1.7 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Proline iminopeptidase-like |Proline iminopeptidase |Xanthomonas campestris, pv. citri [TaxId: 339]
d2pbla1 : (ILE111) (SER166) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
d3ddua2 : (GLN524) (VAL578) [view usage] : c.69.1.4 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Prolyl oligopeptidase, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b9gb_ : (GLY117) (GLY165) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d4b6gb_ : (LEU125) (SER169) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
d1qtra_ : (THR87) (GLY137) [view usage] : c.69.1.7 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Proline iminopeptidase-like |Proline aminopeptidase |Serratia marcescens [TaxId: 615]
d1y37a_ : (SER78) (ASP128) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia sp. [TaxId: 384033]
d2ff2a_ : (GLY117) (GLY165) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d2pl5a1 : (ILE127) (ALA177) [view usage] : c.69.1.40 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |O-acetyltransferase |Homoserine O-acetyltransferase |Leptospira interrogans [TaxId: 173]
d1k8qa_ : (PHE123) (ALA180) [view usage] : c.69.1.6 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Gastric lipase |Gastric lipase |Dog (Canis familiaris) [TaxId: 9615]
d1zoia_ : (MET72) (ALA122) [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Pseudomonas putida [TaxId: 303]
d2pblb_ : (ILE111) (SER166) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.2, c.66, c.70