Tableau information
Concept source: d1doaa_ amino acid (a.a.) range (ASP65)(GLY114)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP65) (GLN74) H1
(VAL77) (SER83) E2
(PRO87) (VAL93) H3
(TRP97) (PRO106) H4
(THR108) (GLY114) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 138.6° E2
H3 -59.3° -148.1° H3
H4 -46.8° 174.5° -30.9° H4
E5 121.0° -21.0° -163.0° 162.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ranc_ : (ARG76) (GLY121) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
d1sqha_ : (THR113) (GLN151) [view usage] : d.108.1.5 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |Hypothetical protein cg14615-pa |Hypothetical protein cg14615-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1enoa_ : (PHE173) (PRO235) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
d3g7nb_ : (MET96) (LEU159) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Penicillium expansum [TaxId: 27334]
d3hn6b_ : (GLY189) (ASP240) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1utea_ : (LEU159) (HIS221) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4l4zb_ : (LEU135) (ILE172) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1j2wd_ : (LEU18) (GLY62) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Thermus thermophilus [TaxId: 274]
d2xvza_ : (PHE189) (HIS245) [view usage] : c.92.1.0 |Chelatase-like |Chelatase |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d2pkfa_ : (LEU129) (SER171) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1zd9a1 : (TRP81) (GLY128) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARL8A [TaxId: 9606]
d3f1lb_ : (ALA87) (SER153) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1zn7a_ : (ASP35) (ARG87) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Human (Homo sapiens) [TaxId: 9606]
d1qgoa_ : (VAL180) (SER236) [view usage] : c.92.1.2 |Chelatase-like |Chelatase |Cobalt chelatase CbiK |Cobalt chelatase CbiK |Salmonella typhimurium [TaxId: 90371]
d1vi5b_ : (ASP47) (GLY97) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d1seza2 : (PHE373) (LYS437) [view usage] : d.16.1.5 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |L-aminoacid/polyamine oxidase |Protoporphyrinogen oxidase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d4rkqd_ : (TYR167) (ALA226) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Arthrobacter sp. [TaxId: 290399]
d1vl1a_ : (THR171) (LYS220) [view usage] : c.124.1.1 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |NagB-like |6-phosphogluconolactonase |Thermotoga maritima [TaxId: 2336]
d1vi5a_ : (ASP47) (GLY97) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d4l3wa_ : (VAL146) (GLY203) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Rhizopus microsporus [TaxId: 4843]
d3hn6a_ : (GLY189) (ASP240) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d4gzia_ : (PRO90) (TYR159) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d2cvpa_ : (MET119) (SER185) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2f7ka_ : (HIS-10) (ASN39) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4egjd1 : (ASP5) (ASP48) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia xenovorans [TaxId: 266265]
d1sura_ : (ASP31) (THR78) [view usage] : c.26.2.2 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |PAPS reductase-like |Phosphoadenylyl sulphate (PAPS) reductase |Escherichia coli [TaxId: 562]
d2zosb_ : (GLY181) (GLY222) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1i60a_ : (ALA132) (SER175) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Hypothetical protein IolI |Bacillus subtilis [TaxId: 1423]
d1wara_ : (VAL157) (HIS219) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mr3f_ : (SER76) (ASN126) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Baker's yeast (Saccharomyces cerevisiae), ARF2 [TaxId: 4932]
d1ybaa1 : (GLY222) (ASP264) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d1j4aa1 : (ASP219) (ASP260) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-lactate dehydrogenase |Lactobacillus helveticus [TaxId: 1587]
d1wzcb_ : (GLY181) (GLY222) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) |Pyrococcus horikoshii [TaxId: 53953]
d3bbla_ : (ASP167) (GLU226) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Chloroflexus aggregans [TaxId: 326427]
d1om0a_ : (TRP201) (ASP257) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Xylanase inhibitor protein I, XIP-I |Wheat (Triticum aestivum) [TaxId: 4565]
d1vi5d_ : (ILE48) (GLY97) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d1vi6a_ : (ILE48) (GLY97) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d1g2qa_ : (ASN36) (ARG89) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1kr0a_ : (ILE195) (SER256) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Hevamine A (chitinase/lysozyme) |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d4r7ta_ : (GLY189) (ASP240) [view usage] : c.124.1.1 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |NagB-like |automated matches |Vibrio cholerae [TaxId: 243277]
d1pbta_ : (THR171) (GLY219) [view usage] : c.124.1.1 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |NagB-like |6-phosphogluconolactonase |Thermotoga maritima [TaxId: 2336]
d1u0bb2 : (ILE207) (ASP263) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Cysteinyl-tRNA synthetase (CysRS) |Escherichia coli [TaxId: 562]
d1dqna_ : (THR37) (GLY99) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Guanine PRTase |Giardia intestinalis [TaxId: 5741]
d3smpb1 : (MET317) (ASP362) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d1c3qa1 : (ALA3) (ALA48) [view usage] : c.72.1.2 |Ribokinase-like |Ribokinase-like |Thiamin biosynthesis kinases |Hydroxyethylthiazole kinase (THZ kinase, ThiK) |Bacillus subtilis [TaxId: 1423]
d2xvxa_ : (SER188) (HIS245) [view usage] : c.92.1.0 |Chelatase-like |Chelatase |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d4jj9c_ : (GLN63) (VAL128) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 257310]
d4jj9a_ : (GLN63) (VAL128) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 257310]
d1fhla_ : (LEU32) (HIS81) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d1imja_ : (SER91) (ALA135) [view usage] : c.69.1.23 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Ccg1/TafII250-interacting factor B (Cib) |Ccg1/TafII250-interacting factor B (Cib) |Human (Homo sapiens) [TaxId: 9606]
d2bq8x_ : (VAL157) (HIS219) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b0na4 : (PRO431) (GLY480) [view usage] : d.134.1.0 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1vi6c_ : (ILE48) (GLY97) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d4qead_ : (THR67) (TYR129) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Brucella abortus [TaxId: 430066]
d1iu9a_ : (MET103) (PRO147) [view usage] : c.78.2.1 |ATC-like |Aspartate/glutamate racemase |Aspartate/glutamate racemase |Aspartate racemase |Pyrococcus horikoshii OT3 [TaxId: 70601]
d1c0ma2 : (THR97) (ILE146) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |Retroviral integrase, catalytic domain |Rous sarcoma virus RSV [TaxId: 11886]
d9ruba1 : (ALA269) (GLY323) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rhodospirillum rubrum [TaxId: 1085]
d3gfva_ : (PHE88) (VAL123) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1qhwa_ : (ASP179) (HIS242) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.2, d.159, c.108, c.26, c.92, c.80, c.124, c.93, c.72, c.23, c.37, c.55, c.78, d.108, c.61, d.134, c.30, d.16,
d.80, c.106