Protein Concepts Dictionary

Tableau information

Concept source:  d4bmsf_  amino acid (a.a.) range (GLN195)(ASP243)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN195)  (THR209) H1
	  (GLY212)  (PRO217) E2
	  (PRO217)  (SER229) H3
	  (SER229)  (VAL235) H4
	  (GLY237)  (ASP243) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2      109.3°   E2                          
H3       54.3°  -59.4°   H3                   
H4       60.0° -108.8°  -63.7°   H4            
E5     -110.6°  124.3°  159.4°  124.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bvra_ :   (GLU209)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d3of2a_ :   (GLY208)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d1uk0b2 :   (GLU148)  (ARG204)   [view usage] : d.166.1.2 |ADP-ribosylation |ADP-ribosylation |Poly(ADP-ribose) polymerase, C-terminal domain |Poly(ADP-ribose) polymerase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3toxa_ :   (THR208)  (ASP250)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d2b4qa_ :   (ASP206)  (ASP251)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4dbza_ :   (SER209)  (CYS255)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d3sjua_ :   (GLU208)  (CYS253)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Streptomyces griseoruber [TaxId: 1943]
 d3ijrf_ :   (PHE243)  (ASN281)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d2ntva_ :   (GLU209)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium leprae [TaxId: 1769]
 d3i3of_ :   (PHE243)  (ASN281)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4bmsf_ :   (GLN195)  (ASP243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia sp. [TaxId: 517192]
 d3i3oe_ :   (PHE243)  (ASN281)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4n0za_ :     (ALA7)   (ASN52)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d4bgea_ :   (GLY208)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2,    c.47,   d.166