Tableau information
Concept source: d1n0hb1 amino acid (a.a.) range (GLN281)(THR334)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN281) (ALA299) H1
(PRO302) (ALA308) E2
(ALA308) (ALA314) H3
(PRO317) (ALA327) H4
(PRO330) (THR334) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -132.8° E2
H3 -119.2° -65.0° H3
H4 -42.6° -174.4° 119.4° H4
E5 125.9° -29.1° -93.0° 147.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2btya1 : (MET1) (PRO64) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Thermotoga maritima [TaxId: 2336]
d1qpba1 : (GLU195) (THR245) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate decarboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1upba1 : (TRP202) (TYR251) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1eoma_ : (TYR65) (GLU128) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Endo-beta-N-acetylglucosaminidase |Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]
d4pmya_ : (ALA196) (GLU254) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1jsca1 : (GLN281) (THR334) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2qs8a2 : (ASP260) (ALA329) [view usage] : c.1.9.18 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Zn-dependent arginine carboxypeptidase-like |Xaa-Pro dipeptidase |Alteromonas macleodii [TaxId: 28108]
d1t9ba1 : (VAL285) (THR334) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1wytb1 : (ARG221) (LEU264) [view usage] : c.67.1.7 |PLP-dependent transferase-like |PLP-dependent transferases |Glycine dehydrogenase subunits (GDC-P) |Glycine dehydrogenase subunit 2 (P-protein) |Thermus thermophilus [TaxId: 274]
d2bruc_ : (ALA20) (PRO70) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |automated matches |Escherichia coli [TaxId: 562]
d1h1la_ : (ASN262) (PHE298) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Klebsiella pneumoniae [TaxId: 573]
d2hx1a_ : (SER5) (ASN53) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Cytophaga hutchinsonii [TaxId: 985]
d3mama_ : (LYS127) (GLU171) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d1poxa1 : (VAL199) (THR244) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1upaa1 : (TRP202) (TYR251) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1d4oa_ : (LEU12) (PRO62) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Cow (Bos taurus) [TaxId: 9913]
d1tmoa2 : (ALA307) (GLY363) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Trimethylamine N-oxide reductase |Shewanella massilia [TaxId: 76854]
d4pn2a_ : (ALA196) (GLU254) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1t9dc1 : (ASN290) (THR334) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1eoka_ : (TYR65) (GLU128) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Endo-beta-N-acetylglucosaminidase |Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]
d4bkma_ : (GLY9) (ASN59) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1powa1 : (VAL199) (THR244) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1vhva_ : (GLU62) (HIS109) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Archaeoglobus fulgidus [TaxId: 2234]
d4a05a_ : (GLN264) (ASN333) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Chaetomium thermophilum [TaxId: 209285]
d1e3ta_ : (GLN63) (LEU112) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d2fv5b_ : (PRO220) (SER287) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d2oxra_ : (HIS112) (LEU164) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1jqea_ : (THR119) (ILE171) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1pnoa_ : (SER296) (HIS346) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d1n0hb1 : (GLN281) (THR334) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4nvtb_ : (ASN110) (PRO170) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Brucella melitensis [TaxId: 546272]
d1n0ha1 : (SER278) (THR334) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1yrba_ : (HIS112) (LEU164) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1t9ab1 : (GLU283) (THR334) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1hgya_ : (PRO233) (ASN302) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]
d1ozfa1 : (ASP194) (THR241) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Catabolic acetolactate synthase |Klebsiella pneumoniae [TaxId: 573]
d4nvta_ : (SER109) (PRO170) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Brucella melitensis [TaxId: 546272]
d2fgza3 : (LEU780) (GLN876) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Pullulanase PulA |Klebsiella pneumoniae [TaxId: 573]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.81, c.94, c.6, c.108, c.90, c.92, c.66, d.92, c.37, c.31, c.73