Tableau information
Concept source: d4tlga2 amino acid (a.a.) range (SER116)(ARG193)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER116) (LYS141) H1
(LEU150) (GLU156) E2
(SER159) (TRP164) H3
(LYS165) (PRO183) H4
(ASN188) (ARG193) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 138.0° E2
H3 -104.2° 117.8° H3
H4 -35.2° -171.3° -69.6° H4
E5 124.1° -14.8° 130.9° 159.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1c30b2 : (SER224) (ILE268) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Carbamoyl phosphate synthetase, small subunit C-terminal domain |Escherichia coli [TaxId: 562]
d2c7fa2 : (SER259) (ALA351) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Clostridium thermocellum [TaxId: 1515]
d2arhb_ : (SER80) (ILE139) [view usage] : d.108.1.9 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |Aq_1966-like |Hypothetical protein Aq_1966 |Aquifex aeolicus [TaxId: 63363]
d2c54a1 : (MET82) (ALA141) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |GDP-mannose-3', 5'-epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1l5xa_ : (THR69) (ALA127) [view usage] : c.106.1.1 |SurE-like |SurE-like |SurE-like |SurE homolog PAE2908 (SurE-alpha) |Pyrobaculum aerophilum [TaxId: 13773]
d1yq2a5 : (LEU376) (LEU439) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Galactosidase, domain 3 |Arthrobacter sp. c2-2 [TaxId: 192168]
d1bxrb2 : (SER224) (CYS269) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Carbamoyl phosphate synthetase, small subunit C-terminal domain |Escherichia coli [TaxId: 562]
d1ex5a_ : (GLY129) (ASP193) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
d1i0bb_ : (SER238) (ASN300) [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase (parathion hydrolase, PTE) |Pseudomonas diminuta [TaxId: 293]
d1uf3a_ : (ALA133) (ALA187) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Hypothetical protein TT1561 |Thermus thermophilus [TaxId: 274]
d1tg7a5 : (LEU117) (GLU198) [view usage] : c.1.8.14 |TIM beta/alpha-barrel |(Trans)glycosidases |Glycosyl hydrolases family 35 catalytic domain |Beta-galactosidase LacA, N-terminal domain |Penicillium sp. [TaxId: 5081]
d3tzba_ : (PHE131) (ALA191) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
d4e3ta_ : (LEU237) (ASN300) [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |automated matches |Brevundimonas diminuta [TaxId: 293]
d3cufa_ : (GLY61) (VAL125) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Cellulomonas fimi [TaxId: 1708]
d1ixya_ : (VAL243) (ASP283) [view usage] : c.87.1.1 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |beta-Glucosyltransferase (DNA-modifying) |beta-Glucosyltransferase (DNA-modifying) |Bacteriophage T4 [TaxId: 10665]
d2v3ga_ : (ARG52) (LEU107) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Clostridium thermocellum [TaxId: 1515]
d1rp8a2 : (VAL27) (ASN92) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d3og2a1 : (LEU117) (GLU198) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d2cita1 : (ARG52) (LEU107) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase H N-terminal domain |Clostridium thermocellum [TaxId: 1515]
d3h4ma_ : (GLY246) (ASN317) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d2g0tb_ : (PHE216) (HIS269) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Hypothetical protein TM0796 |Thermotoga maritima [TaxId: 2336]
d1l8xb_ : (TRP199) (SER275) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1j9ja_ : (THR70) (SER128) [view usage] : c.106.1.1 |SurE-like |SurE-like |SurE-like |SurE homolog TM1662 |Thermotoga maritima [TaxId: 2336]
d2cuna_ : (ARG3) (HIS57) [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1uf3b_ : (ALA133) (ALA187) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Hypothetical protein TT1561 |Thermus thermophilus [TaxId: 274]
d3vm5a1 : (GLU76) (ALA198) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Oryzias latipes [TaxId: 8090]
d4klaa_ : (HIS230) (LEU299) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Human (Homo sapiens) [TaxId: 9606]
d1iy9a_ : (PHE172) (ASN220) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Bacillus subtilis [TaxId: 1423]
d2v4na_ : (THR67) (LEU125) [view usage] : c.106.1.0 |SurE-like |SurE-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d2hzba1 : (THR229) (TYR290) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |Hypothetical protein BH3568 |Bacillus halodurans [TaxId: 86665]
d1jdbf2 : (SER224) (CYS269) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Carbamoyl phosphate synthetase, small subunit C-terminal domain |Escherichia coli [TaxId: 562]
d3o6aa_ : (GLY278) (SER364) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d1vcoa2 : (GLY26) (THR101) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |CTP synthase PyrG, N-terminal domain |Thermus thermophilus [TaxId: 274]
d1lbqa_ : (TRP199) (SER275) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2gyib_ : (LYS72) (GLY137) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces olivochromogenes [TaxId: 1963]
d1czha_ : (TYR70) (GLU123) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d3ldva_ : (ALA162) (ARG211) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Vibrio cholerae [TaxId: 243277]
d3bsha1 : (VAL27) (ASN92) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d1b1ya_ : (LEU37) (SER89) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Barley (Hordeum vulgare) [TaxId: 4513]
d2bvda_ : (ARG52) (LEU107) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Clostridium thermocellum [TaxId: 1515]
d1l5xb_ : (THR69) (ALA127) [view usage] : c.106.1.1 |SurE-like |SurE-like |SurE-like |SurE homolog PAE2908 (SurE-alpha) |Pyrobaculum aerophilum [TaxId: 13773]
d4tlga2 : (SER116) (ARG193) [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4uyba2 : (THR116) (LYS193) [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, d.159, c.92, c.66, c.23, c.37, c.86, c.87, c.13, d.108, c.106, c.143