Tableau information
Concept source: d4nf8b_ amino acid (a.a.) range (GLY61)(VAL125)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY61) (THR73) H1
(THR77) (LEU82) E2
(GLY98) (GLN106) H3
(VAL109) (SER114) E4
(GLU119) (VAL125) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 160.7° E2
H3 -24.2° 136.9° H3
E4 142.7° -55.0° -165.9° E4
H5 -33.6° 135.0° 24.5° -158.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2rc9b_ : (GLY70) (ILE134) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kcdb_ : (GLY70) (ILE134) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4nf8b_ : (GLY61) (VAL125) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ylna_ : (GLY73) (THR126) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d1lb8b_ : (GLY34) (ILE100) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d4kcda_ : (GLY70) (ILE134) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4jwxa_ : (GLY61) (VAL125) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ieea_ : (TYR49) (PHE101) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2qs4a_ : (GLY34) (VAL98) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ah2a_ : (HIS62) (ARG143) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Serine protease PB92 (subtilisin PB92) |Bacillus alcalophilus [TaxId: 1445]
d4bdlb_ : (TYR462) (ILE527) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2q88a_ : (ALA36) (VAL89) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d1wvja_ : (TYR35) (ILE100) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3fata_ : (GLY32) (ILE98) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4io4b_ : (GLY39) (VAL96) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Adineta vaga [TaxId: 104782]
d4psha_ : (GLY33) (LYS84) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1m5da_ : (GLY34) (ILE100) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d3m3fa_ : (GLY34) (ILE100) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3zsfa_ : (GLY73) (THR126) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d1y20a_ : (GLY65) (ILE135) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4prsb_ : (GLY33) (VAL86) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.41