Tableau information
Concept source: d2gnpa1 amino acid (a.a.) range (SER266)(ASP317)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER266) (ILE273) H1
(PRO274) (ALA280) E2
(VAL286) (ASN296) H3
(ASN299) (THR303) E4
(LYS305) (ASP317) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -102.0° E2
H3 -77.2° -165.8° H3
E4 84.0° -19.5° -160.1° E4
H5 -122.7° 98.7° -70.7° 115.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2uyha_ : (LYS7) (ASN52) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |automated matches |Haemophilus haemolyticus [TaxId: 726]
d1wdka3 : (PHE391) (ALA438) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Fatty oxidation complex alpha subunit, middle domain |Pseudomonas fragi [TaxId: 296]
d1uioa_ : (TYR172) (LYS232) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Mouse (Mus musculus) [TaxId: 10090]
d4l4zb_ : (PRO269) (SER317) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1uipa_ : (TYR172) (LYS232) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Mouse (Mus musculus) [TaxId: 10090]
d4l4za_ : (PRO269) (SER317) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1xvua1 : (GLY10) (PRO56) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
d1knwa2 : (GLN34) (GLY87) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Escherichia coli [TaxId: 562]
d3fj1c_ : (SER248) (GLY327) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
d3ih0a_ : (ILE151) (GLY203) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d4oqpa_ : (GLU264) (ASN311) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d4cg3a_ : (TRP161) (ASN212) [view usage] : c.69.1.16 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Lipase |automated matches |Thermobifida fusca [TaxId: 2021]
d2gnpa1 : (SER266) (ASP317) [view usage] : c.124.1.8 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |SorC sugar-binding domain-like |Transcriptional regulator SP0247 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4a6tc_ : (THR196) (GLY278) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d3aama_ : (GLY196) (ALA270) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3gbua_ : (ILE151) (GLY203) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d4oqqa_ : (GLU264) (VAL310) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1e5da2 : (ASP68) (HIS113) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain |Desulfovibrio gigas [TaxId: 879]
d4bp0c_ : (ASN81) (ASN141) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2okgb_ : (GLN291) (ARG338) [view usage] : c.124.1.8 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |SorC sugar-binding domain-like |Central glycolytic gene regulator CggR |Bacillus subtilis [TaxId: 1423]
d2v4md_ : (GLY596) (ASP642) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i6ua1 : (ARG34) (GLN77) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1t0ba_ : (ASP59) (MET113) [view usage] : c.23.16.6 |Flavodoxin-like |Class I glutamine amidotransferase-like |ThuA-like |GK2113 homologue |Bacillus stearothermophilus [TaxId: 1422]
d2uyca_ : (LYS7) (ASN52) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |automated matches |Haemophilus haemolyticus [TaxId: 726]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.67, c.69, c.2, d.157, c.66, c.80, c.124, c.72, c.23, c.78