Tableau information
Concept source: d3eq5h_ amino acid (a.a.) range (THR179)(LEU233)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR179) (TYR191) H1
(TYR191) (CYS197) E2
(THR198) (GLY209) H3
(PRO216) (THR222) E4
(THR222) (LEU233) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -122.2° E2
H3 142.8° -70.7° H3
E4 39.5° 133.7° 104.7° E4
H5 109.3° -128.3° -66.0° 84.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3k2ja_ : (LEU345) (GLN408) [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tdca1 : (ALA1863) (ILE1897) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq5f_ : (THR179) (PRO236) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l8rb_ : (LEU226) (CYS279) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |Retinal determination protein Dachshund |Human (Homo sapiens) [TaxId: 9606]
d3eq5g_ : (THR179) (LEU233) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq5d_ : (THR179) (PRO236) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fxac_ : (HIS73) (PHE121) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Protease production regulatory protein Hpr |Bacillus subtilis [TaxId: 1423]
d1m64a3 : (GLU378) (LEU429) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
d1l8ra_ : (LEU226) (CYS279) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |Retinal determination protein Dachshund |Human (Homo sapiens) [TaxId: 9606]
d3eq5j_ : (THR179) (LEU233) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq5e_ : (THR179) (LEU233) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq5i_ : (LEU180) (LEU233) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kssa3 : (GLU378) (LEU429) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
d2b7ra3 : (ASP378) (LEU429) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
d2fnpa1 : (LYS163) (ILE222) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Pleiotropic regulator of virulence genes, SarA |Staphylococcus aureus [TaxId: 1280]
d3eq5h_ : (THR179) (LEU233) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq5b_ : (THR179) (PRO236) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3eq5a_ : (THR179) (PRO236) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sbxa_ : (SER135) (LEU189) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |Ski oncogene |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.14, a.4, d.168, a.29, a.6