Tableau information
Concept source: d1chda_ amino acid (a.a.) range (ALA288)(ALA343)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA288) (GLY298) H1
(TRP300) (GLN304) E2
(PRO315) (MET321) H3
(SER325) (ASP329) E4
(ASP329) (ALA343) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -148.2° E2
H3 -45.8° -139.5° H3
E4 124.7° -31.8° -154.2° E4
H5 33.1° -173.7° 46.8° 143.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1z2da_ : (SER69) (ALA135) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Bacillus subtilis [TaxId: 1423]
d1v8pa_ : (THR89) (GLN133) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PAE2754 |Pyrobaculum aerophilum [TaxId: 13773]
d2ow6a3 : (ALA312) (ALA392) [view usage] : c.6.2.1 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |alpha-mannosidase |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1e7kb_ : (GLY38) (GLY94) [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Spliceosomal 15.5kd protein |Human (Homo sapiens) [TaxId: 9606]
d1ljla_ : (ASN69) (ARG131) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Staphylococcus aureus [TaxId: 1280]
d4lw2a_ : (ALA102) (ILE157) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1chda_ : (ALA288) (ALA343) [view usage] : c.40.1.1 |Methylesterase CheB, C-terminal domain |Methylesterase CheB, C-terminal domain |Methylesterase CheB, C-terminal domain |Methylesterase CheB, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d1jl3a_ : (SER69) (GLY138) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Bacillus subtilis [TaxId: 1423]
d1js1x2 : (ALA183) (GLU228) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Transcarbamylase-like protein |Bacteroides fragilis [TaxId: 817]
d1xhka_ : (VAL590) (PHE637) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Methanococcus jannaschii [TaxId: 2190]
d2x8wa_ : (GLY59) (VAL124) [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |automated matches |Thermus sp. [TaxId: 405418]
d1ru3a_ : (ASP168) (GLY234) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Monomeric acetyl-CoA synthase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1np3a2 : (CYS33) (ALA73) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Class I ketol-acid reductoisomerase (KARI) |Pseudomonas aeruginosa [TaxId: 287]
d4jz6a_ : (ALA160) (ALA218) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1v8pb_ : (THR89) (ALA131) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PAE2754 |Pyrobaculum aerophilum [TaxId: 13773]
d1yt8a4 : (GLY307) (SER361) [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Thiosulfate sulfurtransferase PA2603 |Pseudomonas aeruginosa [TaxId: 287]
d3u7ba_ : (LEU5) (LYS49) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1v96b_ : (ASP95) (GLU145) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PH0500 |Pyrococcus horikoshii [TaxId: 53953]
d2hlsa2 : (GLU126) (GLY193) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aeropyrum pernix [TaxId: 272557]
d3ml1a1 : (THR198) (ASN252) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
d2jbwc_ : (ARG282) (GLY353) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d1nx9a2 : (LEU317) (LYS407) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |Alpha-amino acid ester hydrolase |Acetobacter pasteurianus [TaxId: 438]
d1a1sa2 : (ALA173) (LYS221) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Pyrococcus furiosus [TaxId: 2261]
d1v8oh_ : (THR89) (GLN133) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PAE2754 |Pyrobaculum aerophilum [TaxId: 13773]
d1ir6a_ : (LEU58) (VAL122) [view usage] : c.107.1.2 |DHH phosphoesterases |DHH phosphoesterases |Exonuclease RecJ |Exonuclease RecJ |Thermus thermophilus [TaxId: 274]
d2isba_ : (ASN88) (LYS139) [view usage] : c.8.9.1 |The "swivelling" beta/beta/alpha domain |FumA C-terminal domain-like |FumA C-terminal domain-like |Fumarate hydratase class I beta subunit |Archaeoglobus fulgidus [TaxId: 2234]
d1oaoc_ : (SER166) (GLY231) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d1zcza1 : (GLU68) (GLU125) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Thermotoga maritima [TaxId: 2336]
d2hlsb2 : (GLU126) (LYS191) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aeropyrum pernix [TaxId: 272557]
d2pfja_ : (SER72) (GLU132) [view usage] : c.52.1.17 |Restriction endonuclease-like |Restriction endonuclease-like |Endonuclease I (Holliday junction resolvase) |automated matches |Enterobacteria phage [TaxId: 10760]
d1r88a_ : (SER217) (ARG299) [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen pt51/mpb51 |Mycobacterium tuberculosis [TaxId: 1773]
d1b93a_ : (GLY69) (SER129) [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
d1e1da_ : (LYS411) (GLY477) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d2cd7a_ : (ASN69) (ARG131) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |automated matches |Staphylococcus aureus [TaxId: 1280]
d4tkza_ : (VAL52) (PHE106) [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 211110]
d1jf8a_ : (ASN69) (ARG131) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Staphylococcus aureus [TaxId: 1280]
d1oaod_ : (SER166) (GLY231) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d3ff1a_ : (LYS163) (ALA217) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Staphylococcus aureus [TaxId: 93062]
d1gnta_ : (LYS411) (GLY477) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d2pfjb_ : (SER72) (GLU132) [view usage] : c.52.1.17 |Restriction endonuclease-like |Restriction endonuclease-like |Endonuclease I (Holliday junction resolvase) |automated matches |Enterobacteria phage [TaxId: 10760]
d2z8yo_ : (SER166) (GLY231) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |automated matches |Moorella thermoacetica [TaxId: 1525]
d1e7ka_ : (GLY38) (GLY94) [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Spliceosomal 15.5kd protein |Human (Homo sapiens) [TaxId: 9606]
d1mjgm_ : (SER166) (GLY231) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d1n0ha3 : (PRO473) (LEU529) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1nf9a_ : (TYR151) (GLU207) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas aeruginosa [TaxId: 287]
d1tilb_ : (ALA58) (GLY114) [view usage] : c.13.2.1 |SpoIIaa-like |SpoIIaa-like |Anti-sigma factor antagonist SpoIIaa |Anti-sigma factor antagonist SpoIIaa |Bacillus stearothermophilus [TaxId: 1422]
d3o5aa1 : (PRO194) (ASN252) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
d1s8ad_ : (GLY69) (ASP134) [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
d1efpa2 : (ALA266) (LEU308) [view usage] : c.31.1.2 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |C-terminal domain of the electron transfer flavoprotein alpha subunit |C-terminal domain of the electron transfer flavoprotein alpha subunit |Paracoccus denitrificans [TaxId: 266]
d1ogya2 : (SER198) (GLY252) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Periplasmic nitrate reductase alpha chain |Rhodobacter sphaeroides [TaxId: 1063]
d1xhkb_ : (VAL590) (PHE637) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Methanococcus jannaschii [TaxId: 2190]
d1v4va_ : (SER215) (SER275) [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |UDP-N-acetylglucosamine 2-epimerase |Thermus thermophilus [TaxId: 274]
d3oehd2 : (GLY162) (GLY248) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2b4ka2 : (ILE320) (LYS407) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |Alpha-amino acid ester hydrolase |Acetobacter pasteurianus [TaxId: 438]
d3qbja2 : (ALA692) (SER764) [view usage] : c.69.1.24 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |DPP6 catalytic domain-like |Dipeptidyl peptidase IV/CD26, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1c7qa_ : (LYS55) (LEU127) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, c.81, c.2, c.6, c.82, c.80, c.37, c.36, c.47, c.107, d.14, c.87, c.31, c.13, c.78, c.8, c.33, d.79,
c.120, c.24, c.52, e.26, c.54, c.46, c.44, c.40