Tableau information
Concept source: d3pmna3 amino acid (a.a.) range (ARG389)(GLY442)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG389) (ASN407) H1
(LEU410) (ALA414) E2
(GLY416) (GLY421) H3
(ASP427) (ASP436) E4
(ASP436) (GLY442) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 167.8° E2
H3 -111.4° 79.5° H3
E4 -30.4° 154.5° -84.3° E4
H5 98.4° -75.6° 136.8° 128.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ewra1 : (PRO4) (PHE60) [view usage] : d.218.1.11 |Nucleotidyltransferase |Nucleotidyltransferase |TM1012-like |Hypothetical protein TM1012 |Thermotoga maritima [TaxId: 2336]
d3qgua_ : (SER386) (ALA436) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d4jwma3 : (PRO151) (VAL215) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Human (Homo sapiens) [TaxId: 9606]
d1r89a2 : (ASP17) (VAL86) [view usage] : d.218.1.7 |Nucleotidyltransferase |Nucleotidyltransferase |Archaeal tRNA CCA-adding enzyme catalytic domain |tRNA nucleotidyltransferase, N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d2dgka_ : (GLY247) (PRO296) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli [TaxId: 562]
d1xsna3 : (ARG389) (ARG441) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d2dvia2 : (ASP17) (LEU87) [view usage] : d.218.1.7 |Nucleotidyltransferase |Nucleotidyltransferase |Archaeal tRNA CCA-adding enzyme catalytic domain |tRNA nucleotidyltransferase, N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d2z1za_ : (SER373) (LEU424) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4hx0a_ : (PRO4) (PHE60) [view usage] : d.218.1.11 |Nucleotidyltransferase |Nucleotidyltransferase |TM1012-like |automated matches |Thermotoga maritima [TaxId: 2336]
d1rzta3 : (ARG389) (GLY442) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d3uq2a3 : (ARG389) (GLU454) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d4k4ie3 : (GLU390) (GLY442) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d4k4hi3 : (ARG389) (GLY455) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d3mghc3 : (PRO388) (ARG441) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d4k4ia3 : (LYS401) (GLY442) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d3pnca3 : (ARG389) (GLY442) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d2iema_ : (PHE52) (SER106) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Escherichia coli [TaxId: 562]
d3pmna3 : (ARG389) (GLY442) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1zjna3 : (ARG152) (VAL215) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, d.58, d.218