Tableau information
Concept source: d2woqa_ amino acid (a.a.) range (ASP151)(VAL218)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP151) (GLY168) H1
(GLN170) (ASP176) E2
(ARG181) (GLY193) H3
(VAL197) (SER208) E4
(PRO213) (VAL218) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 160.4° E2
H3 -40.8° 151.8° H3
E4 136.6° -25.7° 167.0° E4
H5 60.6° -121.5° 35.1° -132.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bdga2 : (PRO365) (ALA458) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Hexokinase |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d3pila_ : (LEU89) (TYR166) [view usage] : d.58.28.0 |Ferredoxin-like |Peptide methionine sulfoxide reductase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4dcha2 : (SER360) (GLY464) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2goka2 : (SER129) (THR206) [view usage] : c.1.9.17 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Imidazolonepropionase-like |Imidazolonepropionase |Agrobacterium tumefaciens [TaxId: 358]
d1nwaa_ : (TYR65) (TYR148) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Mycobacterium tuberculosis [TaxId: 1773]
d1mioa_ : (CYS53) (PHE117) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Clostridium pasteurianum [TaxId: 1501]
d1t3ka_ : (ASP52) (LYS117) [view usage] : c.46.1.1 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Cell cycle control phosphatase, catalytic domain |Dual specificity phosphatase Cdc25 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3u95a1 : (SER132) (PHE191) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermotoga neapolitana [TaxId: 309803]
d1qhoa4 : (LEU58) (GLY166) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
d4p3xa_ : (ASP35) (ARG86) [view usage] : c.145.1.0 |NadA-like |NadA-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1vddb_ : (LEU127) (GLY192) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Deinococcus radiodurans [TaxId: 1299]
d2df4a1 : (SER155) (SER199) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Glutamyl-tRNA(Gln) amidotransferase subunit A |Staphylococcus aureus [TaxId: 1280]
d1bg3a4 : (THR812) (LEU911) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fvaa_ : (PHE128) (ASP213) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Cow (Bos taurus) [TaxId: 9913]
d4nzpa1 : (LEU93) (GLY168) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1vddc_ : (ILE124) (GLY192) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Deinococcus radiodurans [TaxId: 1299]
d2l90a_ : (GLU130) (PRO214) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Mouse (Mus musculus) [TaxId: 10090]
d1hkba4 : (THR812) (GLU914) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d1fp4b_ : (PRO72) (PHE125) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Azotobacter vinelandii [TaxId: 354]
d2cuna_ : (THR69) (LYS121) [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d3rjya_ : (THR173) (HIS235) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fervidobacterium nodosum [TaxId: 381764]
d3vdpa_ : (LYS123) (ARG193) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
d1miob_ : (PRO25) (PHE78) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Clostridium pasteurianum [TaxId: 1501]
d4gwba_ : (TYR63) (TYR146) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3edda2 : (LEU154) (ASN241) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Flavobacterium sp. [TaxId: 197856]
d4o6pc_ : (ARG121) (ARG193) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
d4o6pb_ : (ILE122) (ARG193) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
d1w5ma_ : (ASP151) (VAL218) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3u95c1 : (SER132) (PHE191) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermotoga neapolitana [TaxId: 309803]
d1w1za_ : (ASN145) (HIS214) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Prosthecochloris vibrioformis [TaxId: 1098]
d2ahua2 : (ASP207) (GLY271) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Putative enzyme YdiF N-terminal domain |Escherichia coli [TaxId: 562]
d4hl7a2 : (PRO298) (PHE410) [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d1b4ea_ : (ASP139) (ALA207) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Escherichia coli [TaxId: 562]
d3sdoa_ : (ILE76) (GLY137) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1i8ja_ : (ASN139) (ALA206) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Escherichia coli [TaxId: 562]
d2woqa_ : (ASP151) (VAL218) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2a1ub_ : (ASN39) (LEU99) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u1ha1 : (GLY271) (TRP350) [view usage] : c.1.22.2 |TIM beta/alpha-barrel |UROD/MetE-like |Cobalamin-independent methionine synthase |5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1j08a2 : (MET122) (GLN187) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Pyrococcus horikoshii [TaxId: 53953]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, d.58, c.26, c.92, c.117, c.124, c.47, c.55, c.86, c.46, e.49, c.145