Protein Concepts Dictionary

Tableau information

Concept source:  d4h8ea_  amino acid (a.a.) range (LEU188)(SER245)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU188)  (TYR193) H1
	  (GLU197)  (THR202) E2
	  (LEU212)  (SER217) H3
	  (GLU220)  (GLN225) E4
	  (GLU233)  (SER245) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2      113.0°   E2                          
H3      -49.8° -126.0°   H3                   
E4      102.3°  -10.9° -120.9°   E4            
H5      -86.4°  136.2°  -41.2°  140.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4q9oa_ :   (LEU183)  (ARG244)   [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 171101]
 d4q9mb_ :   (LEU183)  (ARG245)   [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 171101]
 d4q9ma_ :   (LEU183)  (ARG244)   [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 171101]
 d1x06a_ :   (VAL181)  (ARG239)   [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
 d1egaa1 :    (HIS67)  (SER144)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |GTPase Era, N-terminal domain |Escherichia coli [TaxId: 562]
 d4q9ob_ :   (LEU183)  (ARG245)   [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 171101]
 d1x09a_ :   (VAL181)  (ASN238)   [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
 d3i9v33 :   (PRO431)  (LEU481)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1x07a_ :   (VAL181)  (ARG239)   [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
 d1x08a_ :   (VAL181)  (ARG239)   [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
 d4h8ea_ :   (LEU188)  (SER245)   [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Staphylococcus aureus [TaxId: 158879]
 d1bxra6 :   (SER873)  (SER935)   [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.81,    c.37,   c.101,   d.142