Tableau information
Concept source: d2w6ka1 amino acid (a.a.) range (SER20)(ASP78)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER20) (GLY36) H1
(ALA44) (ILE48) E2
(PRO55) (GLU65) H3
(PRO67) (ALA72) E4
(ALA72) (ASP78) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 117.8° E2
H3 -58.7° -172.4° H3
E4 96.1° -25.5° 147.4° E4
H5 18.8° -105.4° 72.9° -88.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3tsma_ : (GLY41) (GLN102) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d3djca1 : (SER52) (SER119) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d1cvia_ : (TYR1057) (TYR1123) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Human (Homo sapiens) [TaxId: 9606]
d1jxaa1 : (LYS452) (GLY505) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
d2x4da_ : (ALA84) (LEU145) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lwha2 : (ILE195) (GLU250) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |4-alpha-glucanotransferase |Thermotoga maritima [TaxId: 2336]
d1e0rb_ : (MET262) (ALA325) [view usage] : c.8.5.2 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |Group II chaperonin (CCT, TRIC), apical domain |Thermosome, A-domain |Thermoplasma acidophilum, beta chain [TaxId: 2303]
d1jcea1 : (TYR73) (ASN140) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]
d1i2pa_ : (LYS4) (ILE45) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
d1i2ra_ : (LYS4) (ILE45) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
d1rpaa_ : (TYR57) (TYR123) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2f9wa1 : (ALA179) (ALA244) [view usage] : c.55.1.13 |Ribonuclease H-like motif |Actin-like ATPase domain |CoaX-like |Type III pantothenate kinase, CoaX |Pseudomonas aeruginosa [TaxId: 287]
d4czga1 : (PHE82) (GLY149) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d4p3xa_ : (PRO89) (ALA127) [view usage] : c.145.1.0 |NadA-like |NadA-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4prsa_ : (ALA1) (LEU60) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3mueb_ : (HIS34) (TYR99) [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Salmonella typhimurium [TaxId: 99287]
d3pgka_ : (VAL144) (ASN200) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3h83a_ : (SER12) (THR77) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d2lcfa_ : (TYR64) (ALA121) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tsmb_ : (GLY41) (GLN102) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d1e0ca1 : (PRO65) (ASP124) [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Sulfurtransferase |Azotobacter vinelandii [TaxId: 354]
d1r3ub_ : (THR14) (SER79) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine-guanine PRTase (HGPRTase) |Thermoanaerobacter tengcongensis [TaxId: 119072]
d2w6la_ : (SER20) (ASP78) [view usage] : c.151.1.1 |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1q2va2 : (ASP263) (GLY329) [view usage] : c.8.5.2 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |Group II chaperonin (CCT, TRIC), apical domain |Thermosome, A-domain |Thermococcus sp. ks-1, alpha chain [TaxId: 79679]
d1yt8a2 : (LEU51) (GLY105) [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Thiosulfate sulfurtransferase PA2603 |Pseudomonas aeruginosa [TaxId: 287]
d3vdpd_ : (ILE122) (ARG193) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
d1tzba_ : (GLU168) (ASN220) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |Glucose-6-phosphate isomerase, conjectural |Pyrobaculum aerophilum [TaxId: 13773]
d3nz1a_ : (LEU33) (ASN90) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d4bofc_ : (ASN341) (GLY395) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d1tzbb_ : (GLU168) (ASN220) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |Glucose-6-phosphate isomerase, conjectural |Pyrobaculum aerophilum [TaxId: 13773]
d2h3gx1 : (SER53) (GLY122) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d1t0bg_ : (ASP59) (MET113) [view usage] : c.23.16.6 |Flavodoxin-like |Class I glutamine amidotransferase-like |ThuA-like |GK2113 homologue |Bacillus stearothermophilus [TaxId: 1422]
d1nd6b_ : (TYR1056) (TYR1122) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Human (Homo sapiens) [TaxId: 9606]
d1a6da2 : (LYS261) (ALA324) [view usage] : c.8.5.2 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |Group II chaperonin (CCT, TRIC), apical domain |Thermosome, A-domain |Thermoplasma acidophilum, alpha chain [TaxId: 2303]
d2f9tb1 : (ALA179) (CYS245) [view usage] : c.55.1.13 |Ribonuclease H-like motif |Actin-like ATPase domain |CoaX-like |Type III pantothenate kinase, CoaX |Pseudomonas aeruginosa [TaxId: 287]
d1i2oa_ : (ASP3) (ILE45) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
d3tc7a_ : (SER32) (ASN90) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3tb6a_ : (VAL186) (SER248) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1e2ba_ : (GLY45) (VAL87) [view usage] : c.44.2.1 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |PTS system, Lactose/Cellobiose specific IIB subunit |Enzyme IIB-cellobiose |Escherichia coli [TaxId: 562]
d3djcb1 : (SER52) (SER119) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d1jcfa1 : (TYR73) (ASN140) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]
d1wpwa_ : (ARG143) (ASN209) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Sulfolobus tokodaii [TaxId: 111955]
d1t6ca1 : (GLU57) (LYS132) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |Exopolyphosphatase Ppx |Aquifex aeolicus [TaxId: 63363]
d1cnva_ : (ASP173) (PRO234) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Seed storage protein |Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]
d3zsff_ : (SER40) (MET100) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d1t0bf_ : (ASP59) (MET113) [view usage] : c.23.16.6 |Flavodoxin-like |Class I glutamine amidotransferase-like |ThuA-like |GK2113 homologue |Bacillus stearothermophilus [TaxId: 1422]
d2cwna1 : (SER13) (MET55) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Mouse (Mus musculus) [TaxId: 10090]
d2c3za_ : (SER32) (ASN90) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1wota_ : (ASP2) (ALA92) [view usage] : d.218.1.5 |Nucleotidyltransferase |Nucleotidyltransferase |Catalytic subunit of bi-partite nucleotidyltransferase |Unnamed putative nucleotidyltransferase |Thermus thermophilus [TaxId: 274]
d3nyza_ : (SER32) (ASN90) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d2w6ka1 : (SER20) (ASP78) [view usage] : c.151.1.1 |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |Cobalamin biosynthesis protein CobE |Pseudomonas aeruginosa [TaxId: 287]
d1i2qa_ : (LYS4) (ALA43) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
d1ulta_ : (SER107) (LEU164) [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Long chain fatty acid-CoA ligase TT0168 |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, c.108, c.26, c.80, c.77, c.93, c.23, c.37, c.55, c.86, c.60, e.23, d.126, c.8, c.61, c.46, d.218, c.44, e.49,
c.145, c.151