Tableau information
Concept source: d4weca_ amino acid (a.a.) range (GLN65)(TYR174)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN65) (GLY80) H1
(ASP83) (PRO94) E2
(LEU104) (HIS128) H3
(GLY135) (THR140) E4
(ILE154) (TYR174) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 148.9° E2
H3 -29.9° 176.9° H3
E4 139.2° -14.1° 167.1° E4
H5 -44.6° 165.3° -17.3° -161.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3amca_ : (SER224) (LEU310) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4jkma3 : (LEU478) (ILE592) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Clostridium perfringens [TaxId: 195102]
d1hkwa2 : (THR94) (GLY153) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Mycobacterium tuberculosis [TaxId: 1773]
d3nfua2 : (TYR291) (CYS354) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d1mv5d_ : (GLY3483) (ALA3545) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Multidrug resistance ABC transporter LmrA, C-terminal domain |Lactococcus lactis [TaxId: 1358]
d1poia_ : (THR6) (GLY65) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Glutaconate:CoA transferase alpha |Acidaminococcus fermentans [TaxId: 905]
d1hkva2 : (THR94) (GLY153) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Mycobacterium tuberculosis [TaxId: 1773]
d1hqxa_ : (LEU220) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xr4a2 : (PRO245) (GLY314) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Putative citrate lyase alpha chain, citF2 |Salmonella typhimurium [TaxId: 90371]
d4qa1b_ : (GLU245) (GLY324) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rega_ : (TRP114) (SER185) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d1tbja1 : (TYR218) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1t5fa1 : (TYR218) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2d62a1 : (SER144) (THR208) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d3amcb_ : (SER224) (LEU310) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2qs8a2 : (PRO175) (GLY249) [view usage] : c.1.9.18 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Zn-dependent arginine carboxypeptidase-like |Xaa-Pro dipeptidase |Alteromonas macleodii [TaxId: 28108]
d4bs0a_ : (ALA221) (GLN302) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]
d3amdc_ : (SER224) (ILE311) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2doub_ : (PRO152) (ARG221) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1npya1 : (ASP103) (TYR163) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase-like protein HI0607 |Haemophilus influenzae [TaxId: 727]
d1szna2 : (LYS244) (ASN304) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Trichoderma reesei [TaxId: 51453]
d3mznb2 : (ASP290) (CYS354) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d3c0ya1 : (ARG779) (GLY861) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |Histone deacetylase 7, HDAC7 |Human (Homo sapiens) [TaxId: 9606]
d3aofa_ : (SER224) (LEU310) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d4b15a_ : (THR97) (ASP170) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Tamarindus indica [TaxId: 58860]
d2rbca_ : (THR129) (ALA182) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1ecea_ : (GLY268) (ILE350) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endocellulase E1 |Acidothermus cellulolyticus [TaxId: 28049]
d3ewfa_ : (GLU245) (GLY324) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tbha1 : (TYR218) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3mzna2 : (TYR291) (CYS354) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d1ji0a_ : (SER140) (ALA205) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Branched chain aminoacid ABC transporter |Thermotoga maritima, TM1139 [TaxId: 2336]
d4ee9a_ : (VAL227) (LYS309) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
d1p8sa_ : (TYR218) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3d5ha_ : (SER85) (GLY165) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Scadoxus multiflorus [TaxId: 82246]
d3k92a2 : (THR287) (GLY341) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3pdia_ : (ASP293) (LEU369) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Azotobacter vinelandii [TaxId: 322710]
d2c31a3 : (ASN376) (MET432) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d1p8ma_ : (TYR218) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1vlla_ : (ALA101) (GLY174) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Archaeal alanine dehydrogenase |Archaeoglobus fulgidus [TaxId: 2234]
d1ta1a_ : (TYR218) (GLY305) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1cb7b_ : (GLY131) (GLU206) [view usage] : c.1.19.2 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Glutamate mutase, large subunit |Glutamate mutase, large subunit |Clostridium cochlearium [TaxId: 1494]
d1edga_ : (TYR296) (ALA375) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase CelA |Clostridium cellulolyticum [TaxId: 1521]
d2whja_ : (ASP200) (ILE281) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Bacillus agaradhaerens [TaxId: 76935]
d1yg6n_ : (ASP18) (PHE82) [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Escherichia coli [TaxId: 562]
d2ji8b3 : (ASN376) (MET432) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d3azra_ : (SER224) (LEU310) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1nofa2 : (PRO240) (GLN313) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Glycosyl hydrolase family 5 xylanase, catalytic domain |Erwinia chrysanthemi [TaxId: 556]
d1yixa1 : (ALA136) (TYR194) [view usage] : c.1.9.12 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |TatD Mg-dependent DNase-like |Putative deoxyribonuclease YcfH |Escherichia coli [TaxId: 562]
d3ikha_ : (SER116) (LEU172) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d3gdla_ : (GLY98) (LYS173) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3azrb_ : (SER224) (ILE311) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3qvqb_ : (THR98) (ALA160) [view usage] : c.1.18.0 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d3i3ya_ : (ASP118) (LEU172) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.2, c.92, c.124, c.14, c.42, c.72, c.37, c.36