Tableau information
Concept source: d3a6ka_ amino acid (a.a.) range (LYS13)(GLY80)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS13) (VAL19) H1
(CYS24) (ALA32) E2
(ASN43) (ILE60) H3
(GLY61) (PRO66) E4
(GLN75) (GLY80) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -117.1° E2
H3 59.8° 165.1° H3
E4 -131.4° -35.3° -158.4° E4
H5 116.5° -91.5° 78.4° -105.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3a6lc_ : (LYS13) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d1rv8b_ : (THR4) (GLY57) [view usage] : c.1.10.2 |TIM beta/alpha-barrel |Aldolase |Class II FBP aldolase |Fructose-bisphosphate aldolase (FBP aldolase) |Thermus aquaticus [TaxId: 271]
d3gzga_ : (SER151) (ASP192) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 92829]
d2wvaa3 : (ASP488) (SER560) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d4mf4e_ : (SER7) (PRO51) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3a6ha_ : (VAL19) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |automated matches |Pseudomonas putida [TaxId: 303]
d3a6hb_ : (THR11) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |automated matches |Pseudomonas putida [TaxId: 303]
d3oe1a3 : (ASP488) (ARG561) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d3a6ka_ : (LYS13) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d4puca_ : (ALA289) (GLY368) [view usage] : a.118.8.6 |alpha-alpha superhelix |TPR-like |SusD-like |automated matches |Bacteroides uniformis [TaxId: 411479]
d3esab_ : (ASP21) (LEU86) [view usage] : c.69.1.30 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Cutinase-like |automated matches |Fusarium solani [TaxId: 70791]
d1zpda3 : (ASP488) (SER560) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Pyruvate decarboxylase |Zymomonas mobilis [TaxId: 542]
d3a6ja_ : (THR11) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d3a6ga_ : (LYS13) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d3a6kf_ : (THR11) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d3a6kc_ : (THR11) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d1ovma3 : (ASN485) (ASN551) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Indole-3-pyruvate decarboxylase |Enterobacter cloacae [TaxId: 550]
d3dwva_ : (LEU30) (PHE93) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1q3ka_ : (THR11) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d2acva_ : (GLY197) (GLN273) [view usage] : c.87.1.10 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDPGT-like |Triterpene UDP-glucosyl transferase UGT71G1 |Medicago truncatula [TaxId: 3880]
d1piia2 : (HIS38) (GLN94) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Indole-3-glycerophosphate synthase, IPGS |Escherichia coli [TaxId: 562]
d2xuma_ : (ASP104) (GLY164) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d2idbb2 : (ASP409) (ILE484) [view usage] : d.333.1.1 |UbiD C-terminal domain-like |UbiD C-terminal domain-like |UbiD C-terminal domain-like |3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD |Escherichia coli [TaxId: 562]
d3a6ke_ : (LYS13) (GLY80) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d3fz9a_ : (GLY5) (GLY58) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Populus tremula [TaxId: 47664]
d2ji8b3 : (TYR505) (LEU559) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d4mf4a_ : (SER7) (PRO51) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2fjka_ : (GLY5) (GLY57) [view usage] : c.1.10.2 |TIM beta/alpha-barrel |Aldolase |Class II FBP aldolase |automated matches |Thermus caldophilus [TaxId: 272]
d4pucb_ : (ALA289) (GLY368) [view usage] : a.118.8.6 |alpha-alpha superhelix |TPR-like |SusD-like |automated matches |Bacteroides uniformis [TaxId: 411479]
d2ji6a3 : (TYR505) (ASN560) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d3p3na_ : (ASP104) (PHE165) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.69, c.94, a.118, c.36, c.47, c.87, c.125, d.333