Tableau information
Concept source: d1wkva1 amino acid (a.a.) range (THR238)(GLU317)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR238) (GLY250) H1
(ARG254) (SER259) E2
(HIS265) (ASP277) H3
(ILE280) (VAL285) E4
(TYR313) (GLU317) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 145.1° E2
H3 -46.8° -167.5° H3
E4 126.1° -22.5° -160.6° E4
E5 100.5° -48.4° 138.3° -26.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1z88a1 : (THR153) (VAL210) [view usage] : c.108.1.12 |HAD-like |HAD-like |Class B acid phosphatase, AphA |Class B acid phosphatase, AphA |Salmonella typhimurium [TaxId: 90371]
d3visb_ : (SER152) (ALA212) [view usage] : c.69.1.16 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Lipase |automated matches |Thermobifida alba [TaxId: 53522]
d1qk3b_ : (GLY49) (SER131) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine-guanine-xanthine PRTase |Toxoplasma gondii [TaxId: 5811]
d1dlia3 : (ALA295) (ASP366) [view usage] : c.26.3.1 |Adenine nucleotide alpha hydrolase-like |UDP-glucose/GDP-mannose dehydrogenase C-terminal domain |UDP-glucose/GDP-mannose dehydrogenase C-terminal domain |UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain |Streptococcus pyogenes [TaxId: 1314]
d1mfza3 : (ASP383) (ILE434) [view usage] : c.26.3.1 |Adenine nucleotide alpha hydrolase-like |UDP-glucose/GDP-mannose dehydrogenase C-terminal domain |UDP-glucose/GDP-mannose dehydrogenase C-terminal domain |GDP-mannose 6-dehydrogenase, GDP-binding domain |Pseudomonas aeruginosa [TaxId: 287]
d4rkqd_ : (LEU122) (PHE165) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Arthrobacter sp. [TaxId: 290399]
d1szob_ : (THR86) (ASP142) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |6-oxo camphor hydrolase |Rhodococcus erythropolis [TaxId: 1833]
d1jsca1 : (CYS357) (GLY425) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2puaa2 : (TYR107) (ALA162) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Purine repressor (PurR), C-terminal domain |Escherichia coli [TaxId: 562]
d1ot5a2 : (ASP287) (TYR360) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Kexin, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1v8ea1 : (GLU109) (HIS170) [view usage] : c.1.18.3 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Glycerophosphoryl diester phosphodiesterase |Putative glycerophosphodiester phosphodiesterase TTHB141 |Thermus thermophilus [TaxId: 274]
d2d5aa_ : (ASP12) (PRO69) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein PH1109 |Pyrococcus horikoshii [TaxId: 53953]
d1z4na_ : (ASP149) (ASP203) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |beta-Phosphoglucomutase |Lactococcus lactis [TaxId: 1358]
d2bm8b_ : (PRO67) (GLN136) [view usage] : c.66.1.50 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |CmcI-like |Cephalosporin hydroxylase CmcI |Streptomyces clavuligerus [TaxId: 1901]
d1z8la2 : (GLU183) (PRO296) [view usage] : c.8.4.1 |The "swivelling" beta/beta/alpha domain |PA domain |PA domain |Glutamate carboxypeptidase II |Human (Homo sapiens) [TaxId: 9606]
d2g6ta1 : (PHE196) (ARG258) [view usage] : c.147.1.1 |CAC2185-like |CAC2185-like |CAC2185-like |Hypothetical protein CAC2185 |Clostridium acetobutylicum [TaxId: 1488]
d1psda1 : (GLY222) (PRO291) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d1to6a_ : (PHE272) (LEU338) [view usage] : c.141.1.1 |Glycerate kinase I |Glycerate kinase I |Glycerate kinase I |Glycerate kinase GlxK |Neisseria meningitidis, (serogroup A) [TaxId: 487]
d2duwa_ : (ILE6) (ALA62) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d3rpha_ : (ASP82) (HIS149) [view usage] : c.72.1.4 |Ribokinase-like |Ribokinase-like |YjeF C-terminal domain-like |automated matches |Bacillus subtilis [TaxId: 1423]
d1thma_ : (TRP112) (ASP185) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Thermitase |Thermoactinomyces vulgaris [TaxId: 2026]
d1z5ga1 : (THR153) (VAL210) [view usage] : c.108.1.12 |HAD-like |HAD-like |Class B acid phosphatase, AphA |Class B acid phosphatase, AphA |Salmonella typhimurium [TaxId: 90371]
d3l5ka_ : (PHE155) (ASN212) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dwga_ : (PRO155) (ALA244) [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1z5gd_ : (LYS154) (VAL210) [view usage] : c.108.1.12 |HAD-like |HAD-like |Class B acid phosphatase, AphA |Class B acid phosphatase, AphA |Salmonella typhimurium [TaxId: 90371]
d1n0ha1 : (CYS357) (GLY425) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Acetohydroxyacid synthase catalytic subunit |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1sgwa_ : (SER127) (ASN194) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Putative ABC transporter PF0895 |Pyrococcus furiosus [TaxId: 2261]
d2auta_ : (THR153) (VAL210) [view usage] : c.108.1.12 |HAD-like |HAD-like |Class B acid phosphatase, AphA |Class B acid phosphatase, AphA |Salmonella typhimurium [TaxId: 90371]
d2g6tb_ : (ALA197) (ARG258) [view usage] : c.147.1.1 |CAC2185-like |CAC2185-like |CAC2185-like |Hypothetical protein CAC2185 |Clostridium acetobutylicum [TaxId: 1488]
d2qeda1 : (ALA32) (ASP91) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Salmonella typhimurium [TaxId: 90371]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.2, c.108, c.79, c.26, d.157, c.66, c.93, c.14, c.72, c.37, c.31, c.8, c.41, c.61, c.147, c.141