Tableau information
Concept source: d2o07b_ amino acid (a.a.) range (SER188)(LYS253)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER188) (ALA196) H1
(GLY201) (GLN206) E2
(HIS213) (LEU227) H3
(ALA232) (THR237) E4
(GLY244) (LYS253) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 144.3° E2
H3 -43.4° 169.4° H3
E4 105.2° -39.1° 147.4° E4
E5 -52.9° 161.4° 9.6° 156.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2gukb_ : (ASN7) (PHE66) [view usage] : d.360.1.1 |PG1857-like |PG1857-like |PG1857-like |Hypothetical protein PG1857 |Porphyromonas gingivalis [TaxId: 837]
d2guka1 : (ASN7) (PHE66) [view usage] : d.360.1.1 |PG1857-like |PG1857-like |PG1857-like |Hypothetical protein PG1857 |Porphyromonas gingivalis [TaxId: 837]
d1yk3c_ : (GLY142) (ALA205) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d1msza_ : (ASP727) (ALA786) [view usage] : d.68.7.1 |IF3-like |R3H domain |R3H domain |SmuBP-2 |Human (Homo sapiens) [TaxId: 9606]
d1yk3d_ : (LEU148) (ALA205) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d2gy9h1 : (PRO5) (LEU62) [view usage] : d.140.1.1 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Escherichia coli [TaxId: 562]
d1i6ua_ : (PRO6) (GLU64) [view usage] : d.140.1.1 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Methanococcus jannaschii [TaxId: 2190]
d2dvia3 : (GLU263) (CYS333) [view usage] : d.58.16.2 |Ferredoxin-like |PAP/Archaeal CCA-adding enzyme, C-terminal domain |Archaeal tRNA CCA-adding enzyme |tRNA nucleotidyltransferase, C-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1yk3f_ : (LEU148) (GLU204) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d1r89a3 : (PRO264) (CYS333) [view usage] : d.58.16.2 |Ferredoxin-like |PAP/Archaeal CCA-adding enzyme, C-terminal domain |Archaeal tRNA CCA-adding enzyme |tRNA nucleotidyltransferase, C-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d2oxta_ : (LYS154) (SER225) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Meaban virus [TaxId: 35279]
d1suia1 : (ARG175) (ARG244) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Caffeoyl-CoA O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1m5sa1 : (ILE92) (PRO143) [view usage] : d.58.33.1 |Ferredoxin-like |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Methanosarcina barkeri [TaxId: 2208]
d1ftra1 : (ARG92) (PRO146) [view usage] : d.58.33.1 |Ferredoxin-like |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Methanopyrus kandleri [TaxId: 2320]
d1yk3h_ : (LEU148) (GLU204) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d3faub_ : (VAL18) (LEU89) [view usage] : d.68.8.1 |IF3-like |SMR domain-like |Smr domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t3eb3 : (ASP553) (ASP615) [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |Gephyrin, domain 5 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4mbub_ : (GLY94) (LYS162) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.68, d.58, c.66, c.57, d.108, d.140, d.360