Protein Concepts Dictionary

Tableau information

Concept source:  d1frka_  amino acid (a.a.) range (THR14)(VAL77)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR14)   (CYS20) H1
	   (CYS24)   (PRO29) E2
	   (PHE31)   (ASP35) E3
	   (ALA43)   (CYS49) H4
	   (PHE67)   (VAL77) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2     -159.4°   E2                          
E3       25.6°  154.9°   E3                   
H4      148.7°  -34.9° -170.0°   H4            
H5      -74.3°   85.1°  -84.6°  101.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fd2a_ :    (THR14)   (TRP78)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1frka_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1pc5a_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1pc4a_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1frja_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1bqxa_ :    (SER15)   (LYS77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Bacillus schlegelii [TaxId: 1484]
 d1fdda_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1f5ca_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1d3wa_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1h98a_ :    (GLN14)   (GLY76)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Thermus thermophilus [TaxId: 274]
 d2zvsb_ :    (ASP12)   (HIS80)   [view usage] : d.58.1.1 |Ferredoxin-like |4Fe-4S ferredoxins |Short-chain ferredoxins |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1f5ba_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1gaoa_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1ff2a_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1b0va_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]
 d1g3oa_ :    (THR14)   (VAL77)   [view usage] : d.58.1.2 |Ferredoxin-like |4Fe-4S ferredoxins |7-Fe ferredoxin |Ferredoxin |Azotobacter vinelandii [TaxId: 354]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58