Tableau information
Concept source: d1vkka_ amino acid (a.a.) range (ASP11)(ASP78)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP11) (ARG24) H1
(ASN29) (LYS35) E2
(MET42) (ASN51) E3
(SER53) (LEU61) H4
(GLN65) (ASP78) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -166.6° E2
E3 30.1° 156.9° E3
H4 -169.7° -13.7° 144.1° H4
E5 -6.9° 167.7° -33.4° -176.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1tmwa_ : (GLU8) (GLY67) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2lxxa_ : (PRO9) (GLN79) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1vkka_ : (ASP11) (ASP78) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Glia maturation factor gamma, GMF-gamma |Mouse (Mus musculus) [TaxId: 10090]
d4blwb_ : (ARG201) (VAL274) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2w0ia_ : (PRO184) (LEU240) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mqpa2 : (ARG79) (ASN142) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d2hd7a_ : (ARG184) (HIS245) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1k9da2 : (ARG79) (ASN142) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1mqqa2 : (ARG79) (ASN142) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1l8aa3 : (GLU706) (THR759) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Pyruvate dehydrogenase E1 component, C-domain |Escherichia coli [TaxId: 562]
d4jd2h_ : (ASP11) (LYS74) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2lj8a_ : (ALA17) (THR79) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2kvka_ : (GLU10) (ASN72) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Leishmania donovani [TaxId: 5661]
d1k9ea2 : (ARG79) (ASN142) [view usage] : d.92.2.2 |Zincin-like |beta-N-acetylhexosaminidase-like domain |alpha-D-glucuronidase, N-terminal domain |alpha-D-glucuronidase, N-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d2vika_ : (LEU3) (LYS52) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Villin, domain 1 (res. 1-126) |Chicken (Gallus gallus) [TaxId: 9031]
d1wfsa_ : (ASP17) (ASP84) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Glia maturation factor gamma, GMF-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1v6fa_ : (ALA17) (HIS83) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Glia maturation factor beta, GMF-beta |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.66, d.92, d.109, c.48