Tableau information
Concept source: d1skob_ amino acid (a.a.) range (ASP40)(GLU115)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP40) (ALA62) H1
(LYS69) (CYS75) E2
(GLY78) (THR83) E3
(LEU88) (ALA94) E4
(GLY99) (GLU115) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 136.6° E2
E3 -44.9° 170.5° E3
E4 125.5° -29.3° 160.1° E4
H5 -82.1° 139.3° -37.2° 145.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2zl1b_ : (ALA42) (GLU116) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |Late endosomal/lysosomal Mp1 interacting protein p14 |Mouse (Mus musculus) [TaxId: 10090]
d1skob_ : (ASP40) (GLU115) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |Late endosomal/lysosomal Mp1 interacting protein p14 |Mouse (Mus musculus) [TaxId: 10090]
d1veua_ : (LEU50) (LEU110) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Mouse (Mus musculus) [TaxId: 10090]
d2vglm1 : (ASN27) (TYR92) [view usage] : d.110.4.2 |Profilin-like |SNARE-like |Clathrin coat assembly domain |Mu2 adaptin (clathrin coat assembly protein AP50) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3huma1 : (LEU252) (ASP313) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Pencillin binding protein 4 (PbpD), N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d2a9sb_ : (SER81) (GLN165) [view usage] : c.51.5.1 |Anticodon-binding domain-like |CinA-like |CinA-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d2w27a2 : (TYR349) (GLN403) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |Hypothetical protein YkuI, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d1veta_ : (ARG46) (LEU110) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Mouse (Mus musculus) [TaxId: 10090]
d3ieia_ : (PRO138) (ASN186) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cj1a_ : (PRO66) (ARG136) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
d3cpta_ : (ARG46) (ALA111) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Human (Homo sapiens) [TaxId: 9606]
d1r27a2 : (ARG29) (ARG107) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Respiratory nitrate reductase 1 alpha chain |Escherichia coli [TaxId: 562]
d3obfa_ : (ASP216) (GLY297) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Arthrobacter aurescens [TaxId: 290340]
d1w63q_ : (SER24) (PHE95) [view usage] : i.23.1.1 |clathrin assemblies |clathrin assemblies |clathrin assemblies |AP1 clathrin adaptor core |Mouse (Mus musculus) [TaxId: 10090]
d1ifqb_ : (SER26) (GLN98) [view usage] : d.110.4.1 |Profilin-like |SNARE-like |Synatpobrevin N-terminal domain |Sec22b |Mouse (Mus musculus) [TaxId: 10090]
d1vetb_ : (ASP41) (PRO118) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |Late endosomal/lysosomal Mp1 interacting protein p14 |Mouse (Mus musculus) [TaxId: 10090]
d1xa6a2 : (SER63) (LYS137) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Beta-chimaerin, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2ajra_ : (THR207) (GLY275) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Putative sugar kinase TM0828 |Thermotoga maritima [TaxId: 2336]
d1bsga_ : (SER217) (THR289) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Streptomyces albus G [TaxId: 1962]
d1skoa_ : (ARG47) (ARG119) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Human (Homo sapiens) [TaxId: 9606]
d2jkri_ : (ASP24) (TYR94) [view usage] : d.110.4.2 |Profilin-like |SNARE-like |Clathrin coat assembly domain |Sigma2 adaptin (clathrin coat assembly protein AP17) |Mouse (Mus musculus) [TaxId: 10090]
d4pwza1 : (ALA89) (LEU156) [view usage] : c.51.2.0 |Anticodon-binding domain-like |TolB, N-terminal domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d2a9sa1 : (SER81) (GLY167) [view usage] : c.51.5.1 |Anticodon-binding domain-like |CinA-like |CinA-like |Competence/damage-inducible protein CinA |Agrobacterium tumefaciens [TaxId: 358]
d3mxya_ : (PRO66) (ARG136) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
d1stza2 : (GLN260) (SER336) [view usage] : d.110.2.3 |Profilin-like |GAF domain-like |HrcA C-terminal domain-like |Heat-inducible transcription repressor HrcA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d4htga2 : (GLU234) (LEU310) [view usage] : d.50.2.0 |dsRBD-like |Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1veub_ : (ASP41) (GLU117) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |Late endosomal/lysosomal Mp1 interacting protein p14 |Mouse (Mus musculus) [TaxId: 10090]
d3eaca_ : (THR88) (ASP159) [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1stzb2 : (GLN260) (SER336) [view usage] : d.110.2.3 |Profilin-like |GAF domain-like |HrcA C-terminal domain-like |Heat-inducible transcription repressor HrcA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1ifqa_ : (SER26) (GLN98) [view usage] : d.110.4.1 |Profilin-like |SNARE-like |Synatpobrevin N-terminal domain |Sec22b |Mouse (Mus musculus) [TaxId: 10090]
d1h8ma_ : (GLY29) (VAL103) [view usage] : d.110.4.1 |Profilin-like |SNARE-like |Synatpobrevin N-terminal domain |Synaptobrevin homolog 1 ykt6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3b0ga4 : (GLN487) (GLY551) [view usage] : d.134.1.0 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d3bw6a_ : (GLY29) (ALA104) [view usage] : d.110.4.1 |Profilin-like |SNARE-like |Synatpobrevin N-terminal domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3a8ia1 : (ASP161) (GLY214) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3a8ka1 : (ASP161) (ALA203) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3b0na4 : (GLN487) (GLY551) [view usage] : d.134.1.0 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2basa2 : (PHE350) (GLN403) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |Hypothetical protein YkuI, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d2zl1a_ : (PHE53) (VAL120) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Human (Homo sapiens) [TaxId: 9606]
d3cptb_ : (ALA42) (GLU117) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |Late endosomal/lysosomal Mp1 interacting protein p14 |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.81, c.66, c.72, d.110, c.51, d.250, d.134, i.23, d.93, d.50