Tableau information
Concept source: d1x49a1 amino acid (a.a.) range (GLY14)(LEU81)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY14) (MET26) H1
(VAL29) (PRO41) E2
(ARG45) (ASP54) E3
(GLU55) (ARG64) E4
(SER65) (LEU81) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 152.9° E2
E3 14.8° 159.5° E3
E4 -165.7° -39.5° 158.6° E4
H5 48.0° 128.9° -36.7° 137.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nsfa2 : (PRO162) (GLY221) [view usage] : d.106.1.2 |SCP-like |SCP-like |Micothiol-dependent maleylpyruvate isomerase C-terminal domain-like |Micothiol-dependent maleylpyruvate isomerase |Corynebacterium glutamicum [TaxId: 1718]
d1stua_ : (ILE2) (LEU65) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |Staufen, domain III |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3itab1 : (SER200) (PHE258) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3j6ve_ : (PRO210) (LEU279) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, mitochondrial (28S subunit) |Cow (Bos taurus) [TaxId: 9913]
d1whqa_ : (ILE4) (ASN73) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |ATP-dependent RNA helicase A, Dhx9 |Mouse (Mus musculus) [TaxId: 10090]
d2hjja1 : (ARG14) (ILE67) [view usage] : d.50.3.3 |dsRBD-like |YcfA/nrd intein domain |YkfF-like |Hypothetical protein YkfF |Escherichia coli [TaxId: 562]
d3adla_ : (GLU160) (ARG224) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3isqa2 : (ILE314) (GLY379) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Human (Homo sapiens) [TaxId: 9606]
d1r7lb_ : (ASN40) (ASP97) [view usage] : d.277.1.1 |Bacillus phage protein |Bacillus phage protein |Bacillus phage protein |Bacillus phage protein |Bacillus cereus [TaxId: 1396]
d1t4na_ : (ASN369) (ARG433) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2b7ta1 : (PRO6) (GLN71) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-specific editase 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1r7la_ : (ASN40) (VAL96) [view usage] : d.277.1.1 |Bacillus phage protein |Bacillus phage protein |Bacillus phage protein |Bacillus phage protein |Bacillus cereus [TaxId: 1396]
d1x49a1 : (GLY14) (LEU81) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-dependent protein kinase pkr |Mouse (Mus musculus) [TaxId: 10090]
d1uhza_ : (PRO8) (GLY74) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |staufen homolog 2 |Mouse (Mus musculus) [TaxId: 10090]
d1qu6a2 : (TYR106) (GLU173) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-dependent protein kinase pkr |Human (Homo sapiens) [TaxId: 9606]
d1t4lb_ : (ASP367) (ASP434) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1uila_ : (THR24) (GLY101) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |ATP-dependent RNA helicase A, Dhx9 |Mouse (Mus musculus) [TaxId: 10090]
d2l3ca_ : (PRO6) (SER68) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-specific editase 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2v77a_ : (THR14) (ASP89) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1npca_ : (TYR77) (ILE138) [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Neutral protease |Bacillus cereus, strain dsm 3101 [TaxId: 1396]
d1qu6a1 : (PHE15) (LYS84) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-dependent protein kinase pkr |Human (Homo sapiens) [TaxId: 9606]
d3it9d1 : (ASN195) (ARG257) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1t4oa_ : (ALA370) (ASP434) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1x48a1 : (TYR8) (LYS74) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-dependent protein kinase pkr |Mouse (Mus musculus) [TaxId: 10090]
d1x47a1 : (SER17) (LEU82) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |Dgcr8 protein |Human (Homo sapiens) [TaxId: 9606]
d2b7va1 : (PRO6) (ALA62) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |dsRNA-specific editase 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, i.1, c.56, d.92, d.32, d.106, d.50, d.277