Tableau information
Concept source: d2o9ca1 amino acid (a.a.) range (PRO258)(LYS319)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO258) (GLY268) H1
(GLY270) (SER276) E2
(ILE287) (GLN292) E3
(THR293) (PRO299) E4
(PRO299) (LYS319) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 118.7° E2
E3 -60.3° 175.5° E3
E4 123.5° 38.6° 137.5° E4
H5 88.4° -44.1° 138.6° -81.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ztua1 : (SER257) (HIS323) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d3mpzc_ : (TRP3) (GLY66) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1gwba_ : (ALA65) (LEU118) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |von Willebrand factor binding domain of glycoprotein Ib alpha |Human (Homo sapiens) [TaxId: 9606]
d3c2wa1 : (SER244) (GLY309) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Pseudomonas aeruginosa [TaxId: 287]
d3zq5a2 : (HIS258) (ASP326) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d3s7na2 : (SER257) (GLU323) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d2k2na1 : (PRO137) (VAL184) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein CYB2465 |Synechococcus sp. [TaxId: 1131]
d2m7ua_ : (GLU521) (HIS584) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d2o7ka_ : (SER62) (LEU104) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Staphylococcus aureus [TaxId: 1280]
d2o9ca1 : (PRO258) (LYS319) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d4eg2a2 : (GLU191) (GLY252) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d2q9ha1 : (THR26) (GLY88) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Haemophilus influenzae [TaxId: 727]
d4glqa_ : (GLU521) (HIS584) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3vv4a_ : (LEU99) (LEU158) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1mc0a2 : (ASP402) (THR464) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains |Mouse (Mus musculus) [TaxId: 10090]
d3mpzd_ : (TRP3) (GLY66) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.10, c.47, c.97, d.110, d.21