Protein Concepts Dictionary

Tableau information

Concept source:  d2zjxa_  amino acid (a.a.) range (PRO2)(GLY56)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO2)    (PRO8) H1
	   (LYS15)   (ILE19) E2
	   (ILE19)   (TYR23) E3
	   (LEU29)   (VAL34) E4
	   (SER47)   (GLY56) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2     -105.0°   E2                          
E3     -114.3°  -62.4°   E3                   
E4       67.9° -149.7°  147.9°   E4            
H5     -119.0°  -83.4°  -22.5°  126.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tocr1 :     (ASN2)   (PHE51)   [view usage] : g.8.1.2 |BPTI-like |BPTI-like |Soft tick anticoagulant proteins |Ornithodorin |Soft tick (Ornithodoros moubata) [TaxId: 6938]
 d3p95e_ :     (PRO2)   (THR54)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d2zvxa_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1zr0b1 :     (ASN1)   (CYS55)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Tissue factor pathway inhibitor |Human (Homo sapiens) [TaxId: 9606]
 d2ddia_ :     (ASP8)   (CYS60)   [view usage] : g.8.1.0 |BPTI-like |BPTI-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2zjxa_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1aapa_ :     (VAL1)   (VAL54)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Alzheimer's amyloid B-protein precursor, APPI |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   g.8