Protein Concepts Dictionary

Tableau information

Concept source:  d1i80b_  amino acid (a.a.) range (VAL101)(GLN170)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL101)  (GLY111) H1
	  (GLN113)  (ASN119) E2
	  (GLY131)  (LEU135) E3
	  (SER137)  (THR143) E4
	  (SER161)  (GLN170) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2      155.0°   E2                          
E3      -54.3°  146.6°   E3                   
E4     -131.7°   69.2°  -97.7°   E4            
H5       87.5°  -67.5° -136.1°  125.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4m1ea_ :    (SER90)  (GLY177)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Planctomyces limnophilus [TaxId: 521674]
 d1v4nc_ :    (ASN72)  (GLY154)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |5'-deoxy-5'-methylthioadenosine phosphorylase |Sulfolobus tokodaii [TaxId: 111955]
 d1i80b_ :   (VAL101)  (GLN170)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
 d4m1eb_ :    (SER90)  (LEU176)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Planctomyces limnophilus [TaxId: 521674]
 d1wtaa_ :    (ASN75)  (GLY158)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Aeropyrum pernix [TaxId: 272557]
 d4m1ee_ :    (SER90)  (GLY177)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Planctomyces limnophilus [TaxId: 521674]
 d1v4na_ :    (ASN72)  (GLY154)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |5'-deoxy-5'-methylthioadenosine phosphorylase |Sulfolobus tokodaii [TaxId: 111955]
 d1hs6a3 :   (THR237)  (ALA284)   [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1i80a_ :   (PRO103)  (GLN170)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
 d1g2oa_ :   (PRO103)  (ASP172)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
 d4gaaa2 :   (THR234)  (ALA281)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56,    d.92