Protein Concepts Dictionary

Tableau information

Concept source:  d2xe0b_  amino acid (a.a.) range (LYS7)(ARG52)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS7)   (GLY19) H1
	   (ASP20)   (ALA31) E2
	   (ALA36)   (THR42) E3
	   (PHE43)   (LYS48) E4
	   (LYS48)   (ARG52) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2       67.4°   E2                          
E3      119.2°  167.2°   E3                   
E4       68.5°  116.9°   60.3°   E4            
H5     -152.8°  -91.8°   78.3°  109.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ooya_ :   (PRO219)  (HIS267)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1bp7a_ :     (ASN6)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-CreI |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2i3pa_ :     (LYS7)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2vbnb_ :     (LYS7)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3s1ya_ :   (PRO219)  (HIS267)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2o7ma_ :     (LYS7)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1p8kz1 :     (THR5)   (ASP40)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-AniI |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
 d2vbna_ :     (LYS7)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d2wzxa_ :   (PRO219)  (HIS267)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2xe0b_ :     (LYS7)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3mxbb_ :     (GLU7)   (ARG52)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3,    d.95