Tableau information
Concept source: d1nrga_ amino acid (a.a.) range (ASP57)(PHE110)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP57) (CYS72) H1
(MET81) (THR87) E2
(LYS91) (MET96) E3
(LYS100) (LYS104) E4
(GLY106) (PHE110) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 131.1° E2
E3 -46.5° 161.8° E3
E4 -148.2° 78.8° -109.3° E4
E5 49.0° -87.0° 81.4° 162.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1s3sa1 : (SER42) (ASN85) [view usage] : b.52.2.3 |Double psi beta-barrel |ADC-like |Cdc48 N-terminal domain-like |Membrane fusion ATPase p97 N-terminal domain , P97-Nn |Mouse (Mus musculus) [TaxId: 10090]
d2z6bd1 : (ILE60) (GLU108) [view usage] : b.106.1.1 |Phage tail proteins |Phage tail proteins |Baseplate protein-like |Baseplate structural protein gp27 |Bacteriophage T4 [TaxId: 10665]
d1tw8a_ : (SER144) (HIS211) [view usage] : c.52.1.19 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease HincII |Restriction endonuclease HincII |Haemophilus influenzae [TaxId: 727]
d1nrga_ : (ASP57) (PHE110) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Human (Homo sapiens) [TaxId: 9606]
d2hq7b_ : (LYS5) (THR51) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypotheical protein CAC3491 |Clostridium acetobutylicum [TaxId: 1488]
d2wv4a_ : (PRO44) (HIS91) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Foot-and-mouth disease virus [TaxId: 12112]
d2hq7a1 : (PHE6) (ASN52) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypotheical protein CAC3491 |Clostridium acetobutylicum [TaxId: 1488]
d1g76a_ : (PRO31) (TYR82) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Escherichia coli [TaxId: 562]
d1dnla_ : (PRO31) (TYR82) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Escherichia coli [TaxId: 562]
d2fhqa1 : (THR5) (SER50) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Putative general stress protein BT1439 |Bacteroides thetaiotaomicron [TaxId: 818]
d1kigh_ : (ALA55) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Cow (Bos taurus) [TaxId: 9913]
d4imha_ : (ASP241) (PRO288) [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2fhqb_ : (THR5) (MSE49) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47, e.62, b.45, b.52, c.52, b.106