Tableau information
Concept source: d2h64a1 amino acid (a.a.) range (THR58)(CYS113)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR58) (SER69) H1
(ILE74) (VAL80) E2
(THR82) (LEU92) E3
(LYS97) (ASP105) E4
(GLU109) (CYS113) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -139.7° E2
E3 120.0° 46.4° E3
E4 -54.7° -134.7° 173.9° E4
E5 46.5° 173.5° -135.4° 44.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3qb4c_ : (THR63) (CYS119) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bk3a_ : (THR58) (CYS113) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-2 (BMP-2) |Human (Homo sapiens) [TaxId: 9606]
d4n1da_ : (THR58) (CYS114) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1reua_ : (THR58) (CYS113) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-2 (BMP-2) |Human (Homo sapiens) [TaxId: 9606]
d1klaa_ : (TYR58) (CYS111) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |TGF-beta1 |Human (Homo sapiens) [TaxId: 9606]
d2gh0c_ : (SER159) (CYS218) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tgja_ : (THR56) (CYS111) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |TGF-beta3 |Human (Homo sapiens) [TaxId: 9606]
d2qcqb_ : (SER52) (CYS109) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gh0d_ : (SER159) (CYS218) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gyra_ : (SER41) (CYS100) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
g.17