Tableau information
Concept source: d2jhif_ amino acid (a.a.) range (ASN161)(ALA209)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN161) (LEU167) H1
(GLY171) (ASP181) E2
(GLY184) (LYS192) E3
(LYS192) (ASP198) E4
(LYS204) (ALA209) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 129.0° E2
E3 -55.7° 162.0° E3
E4 -127.8° 103.1° 75.7° E4
E5 46.2° -83.0° 97.9° 173.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fzbb1 : (GLY295) (LYS344) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d2j61a_ : (ASN152) (ALA200) [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m1jb1 : (GLY299) (ASN348) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Chicken (Gallus gallus), beta [TaxId: 9031]
d1xfda1 : (GLY181) (TYR218) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3wp5a_ : (THR71) (ASP114) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
d1lvba_ : (ASN12) (THR43) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |TEV protease (nucleat inclusion protein A, NIA) |Tobacco etch virus, TEV [TaxId: 12227]
d1fzab1 : (GLY295) (LYS344) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d1lwub1 : (GLY315) (ASP364) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), beta [TaxId: 7757]
d2jufa_ : (TYR14) (PHE58) [view usage] : b.34.9.4 |SH3-like barrel |Tudor/PWWP/MBT |CPH domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jc9a_ : (ASN127) (GLY178) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Tachylectin 5a |Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]
d1z3sa_ : (ASN357) (GLY405) [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t2pa_ : (PHE130) (THR203) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase A |Staphylococcus aureus [TaxId: 1280]
d1re3b1 : (GLY295) (LYS344) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d2q15a_ : (GLU1) (ALA43) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d4jzca_ : (ASN79) (GLY127) [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m1je1 : (GLY299) (ASN348) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Chicken (Gallus gallus), beta [TaxId: 9031]
d1fida_ : (ASN230) (ALA279) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), gamma [TaxId: 9606]
d1fzcb1 : (GLY295) (LYS344) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d1lvod_ : (GLU54) (VAL90) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Transmissible gastroenteritis virus [TaxId: 11149]
d1n86b1 : (GLY295) (LYS344) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d3tgva_ : (LEU14) (LEU56) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Vibrio cholerae [TaxId: 345073]
d1qa7a_ : (SER43) (PRO91) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis A virus [TaxId: 208726]
d1fzda_ : (ASN692) (SER738) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), fibrinogen-420, alpha-E [TaxId: 9606]
d2wcwa_ : (SER63) (GLU111) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2aneh_ : (ARG33) (GLN96) [view usage] : b.122.1.10 |PUA domain-like |PUA domain-like |LON domain-like |ATP-dependent protease La (Lon), N-terminal domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, b.29, b.47, b.50, d.171, b.122, b.45, c.52, b.34, b.100