Tableau information
Concept source: d2d01a_ amino acid (a.a.) range (PHE75)(ARG124)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE75) (GLY86) H1
(ASN89) (GLU93) E2
(GLU93) (GLN99) E3
(PRO102) (LYS111) E4
(TYR118) (ARG124) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 174.0° E2
E3 -116.3° -69.2° E3
E4 6.3° 173.6° 115.8° E4
E5 145.8° -28.9° -87.5° 150.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vkia_ : (TRP448) (ASP488) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3t50b_ : (PRO79) (LEU137) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
d1f98a_ : (SER72) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d3h82a_ : (SER286) (SER345) [view usage] : d.110.3.7 |Profilin-like |PYP-like sensor domain (PAS domain) |Hypoxia-inducible factor Hif2a, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pr6a_ : (PRO72) (ASP125) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1gswa_ : (PHE75) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d3f1nb_ : (HIS401) (ASN463) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w1da_ : (TRP448) (ASP488) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
d2kdka_ : (HIS362) (LEU422) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gsxa_ : (SER72) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d1n9la_ : (PRO67) (ASP122) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |Putative blue light receptor, phot-lov1 domain |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d2b02a_ : (GLN405) (ASN463) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i9va_ : (PHE75) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d4eq1a_ : (GLN405) (ASN463) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wcwc_ : (THR6) (ARG55) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3c2wa3 : (PRO66) (ALA115) [view usage] : d.110.3.9 |Profilin-like |PYP-like sensor domain (PAS domain) |BphP N-terminal domain-like |Bacteriophytochrome BphP |Pseudomonas aeruginosa [TaxId: 287]
d1gsva_ : (SER72) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d1otea_ : (SER72) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d1odva_ : (SER72) (ARG124) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d2wcza_ : (THR6) (ARG55) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4gs9b_ : (ASP404) (ASN463) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.110, b.55, c.52