Protein Concepts Dictionary

Tableau information

Concept source:  d2furb_  amino acid (a.a.) range (ASP21)(GLY62)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP21)   (ASN31) H1
	   (CYS34)   (ILE39) E2
	   (ILE43)   (PRO48) E3
	   (MSE50)   (GLU54) E4
	   (LYS56)   (GLY62) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2     -108.7°   E2                          
E3       64.8°  167.5°   E3                   
E4     -135.0°  104.4°  -76.5°   E4            
E5       31.6°  -77.3°   94.9°  145.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1w9aa_ :     (ASP7)   (SER50)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein Rv1155 |Mycobacterium tuberculosis [TaxId: 1773]
 d1w9ab_ :     (VAL5)   (SER50)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein Rv1155 |Mycobacterium tuberculosis [TaxId: 1773]
 d1xhna1 :    (ALA19)   (LEU71)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Cellular repressor of E1A-stimulated genes CREG1 |Human (Homo sapiens) [TaxId: 9606]
 d1w3oa1 :    (SER23)   (THR72)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |NimA-related protein DR0842 |Deinococcus radiodurans [TaxId: 1299]
 d3kyga1 :    (SER29)   (GLU72)   [view usage] : b.45.2.2 |Split barrel-like |PilZ domain-like |PilZ domain-associated domain |automated matches |Vibrio cholerae [TaxId: 666]
 d1xxoa_ :     (ASP7)   (SER50)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein Rv1155 |Mycobacterium tuberculosis [TaxId: 1773]
 d1ci0a_ :    (ILE36)   (SER89)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3a6qa_ :     (GLY4)   (PRO47)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |FMN-binding protein |Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]
 d2furb_ :    (ASP21)   (GLY62)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein Ta1372 |Thermoplasma acidophilum [TaxId: 2303]
 d1xhnb_ :    (ALA19)   (LEU71)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2arza1 :     (SER2)   (LEU50)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein PA4388 |Pseudomonas aeruginosa [TaxId: 287]
 d1ci0b_ :    (ILE36)   (SER89)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1xhnd_ :    (ALA19)   (LEU71)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2fura1 :    (SER20)   (GLY62)   [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein Ta1372 |Thermoplasma acidophilum [TaxId: 2303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.45