Tableau information
Concept source: d4nnsa_ amino acid (a.a.) range (PHE27)(ASP71)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE27) (ALA36) H1
(ASN39) (ASN45) E2
(ASP47) (SER53) E3
(ASN59) (PHE64) E4
(GLY67) (ASP71) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -76.7° E2
E3 103.9° 168.1° E3
E4 -85.2° -28.7° 162.1° E4
E5 129.4° 122.9° -47.6° 135.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3g0bb1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3l7zg1 : (ILE14) (LEU90) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d3k9fa_ : (SER124) (PRO180) [view usage] : e.11.1.1 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |DNA Gyrase A |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3m2la_ : (ALA1) (TYR65) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d4gwza_ : (SER148) (ASP197) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4n8eb1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4gwsa_ : (SER148) (ASP197) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1crba_ : (VAL27) (GLU71) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinol-binding protein II (CRBP) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3d8ca_ : (PRO253) (LYS298) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d3ivma1 : (SER121) (ASP171) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d2vfba_ : (HIS199) (LEU238) [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |automated matches |Mycobacterium marinum [TaxId: 1781]
d2gbca1 : (THR42) (ILE86) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2vzea_ : (ASP431) (PRO475) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1e8ma1 : (SER120) (PRO165) [view usage] : b.69.7.1 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Prolyl oligopeptidase, N-terminal domain |Prolyl oligopeptidase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1fsaa_ : (SER148) (ASP197) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d3m4da_ : (ALA1) (TYR65) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d3b7wa_ : (PRO430) (PRO475) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ffva1 : (THR42) (ILE86) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2yc0a_ : (PHE252) (LYS298) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d1qiua2 : (SER351) (SER386) [view usage] : b.83.1.1 |Triple beta-spiral |Fibre shaft of virus attachment proteins |Adenovirus |Adenovirus |Human adenovirus type 2 [TaxId: 10515]
d3raea_ : (SER124) (PRO180) [view usage] : e.11.1.0 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3k41b_ : (GLY13) (GLY78) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |Cow (Bos taurus) [TaxId: 9913]
d1v1ic1 : (SER351) (SER386) [view usage] : b.83.1.1 |Triple beta-spiral |Fibre shaft of virus attachment proteins |Adenovirus |Adenovirus |Human adenovirus type 2 [TaxId: 10515]
d1e5ta1 : (SER120) (PRO165) [view usage] : b.69.7.1 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Prolyl oligopeptidase, N-terminal domain |Prolyl oligopeptidase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d4gdyb_ : (THR8) (GLY64) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x70a1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4a5sa1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3m85g1 : (MET1) (LEU85) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 2,ECX2 |Archaeoglobus fulgidus [TaxId: 2234]
d3qbja1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1keha_ : (THR197) (VAL239) [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Brevundimonas diminuta [TaxId: 293]
d1gw0a3 : (ILE389) (GLY444) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d2nn6a1 : (SER7) (GLU81) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease RRP45 |Human (Homo sapiens) [TaxId: 9606]
d1s31a_ : (PRO373) (MET449) [view usage] : d.23.1.1 |Tubby C-terminal domain-like |Tubby C-terminal domain-like |Transcriptional factor tubby, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xuma_ : (PHE252) (LYS298) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d1o6ga1 : (SER120) (PRO165) [view usage] : b.69.7.1 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Prolyl oligopeptidase, N-terminal domain |Prolyl oligopeptidase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1yl4o1 : (THR6) (ARG86) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Ribosomal protein S12 |Thermus thermophilus [TaxId: 274]
d1na8a_ : (HIS491) (ASN557) [view usage] : b.1.10.2 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |gamma-adaptin C-terminal appendage domain-like |ADP-ribosylation factor binding protein Gga1 domain |Human (Homo sapiens) [TaxId: 9606]
d3m7nh1 : (ILE5) (VAL86) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 2,ECX2 |Archaeoglobus fulgidus [TaxId: 2234]
d2ajli1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1jbha_ : (ASN26) (ASP73) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinol-binding protein II (CRBP) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4oy7a_ : (PHE113) (ASN176) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1ilta_ : (GLY37) (LEU80) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-1 receptor antagonist protein |Human (Homo sapiens) [TaxId: 9606]
d2w0xa_ : (PHE252) (LYS298) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d1j2ea1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1r9ma1 : (THR44) (VAL88) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3dkha3 : (ILE389) (GLY444) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d2xzmz_ : (GLY4) (GLY62) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1maeh_ : (SER1) (ALA74) [view usage] : b.69.2.1 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Methylamine dehydrogenase, H-chain |Methylamine dehydrogenase, H-chain |Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, b.82, c.67, b.69, i.1, b.40, d.153, b.60, d.14, d.3, b.6, e.7, b.1, e.23, e.11, b.42, f.6, b.83, b.64, d.23