Protein Concepts Dictionary

Tableau information

Concept source:  d3owod_  amino acid (a.a.) range (GLU116)(PRO177)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU116)  (GLU121) H1
	  (PRO132)  (ASN137) E2
	  (ARG148)  (THR153) E3
	  (VAL159)  (ASP165) E4
	  (MET171)  (PRO177) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2      -79.5°   E2                          
E3     -126.5°   74.4°   E3                   
E4       67.8° -121.8°  162.1°   E4            
E5      -91.0°  -19.7°   79.4° -113.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rrma_ :   (VAL119)  (ALA179)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Lactaldehyde reductase FucO |Escherichia coli [TaxId: 562]
 d1vhda_ :   (SER115)  (PRO172)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Alcohol dehydrogenase TM0920 |Thermotoga maritima [TaxId: 2336]
 d1vljb_ :   (TRP119)  (ASP177)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |NADH-dependent butanol dehydrogenase A (TM0820) |Thermotoga maritima [TaxId: 2336]
 d1rrmb_ :   (VAL119)  (ALA179)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Lactaldehyde reductase FucO |Escherichia coli [TaxId: 562]
 d1o2db_ :   (ASP121)  (PRO172)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Alcohol dehydrogenase TM0920 |Thermotoga maritima [TaxId: 2336]
 d1o2da_ :   (SER115)  (PRO172)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Alcohol dehydrogenase TM0920 |Thermotoga maritima [TaxId: 2336]
 d1vlja_ :   (TRP119)  (ASP177)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |NADH-dependent butanol dehydrogenase A (TM0820) |Thermotoga maritima [TaxId: 2336]
 d2bi4a_ :   (VAL119)  (ALA179)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |automated matches |Escherichia coli [TaxId: 562]
 d3owod_ :   (GLU116)  (PRO177)   [view usage] : e.22.1.0 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
 d1oj7a_ :   (TRP117)  (PRO177)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Hypothetical oxidoreductase yqhD |Escherichia coli [TaxId: 562]
 d1kq3a_ :    (LYS93)  (THR152)   [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Glycerol dehydrogenase |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.22