Tableau information
Concept source: d4poqi_ amino acid (a.a.) range (ASN219)(LYS300)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN219) (THR222) H1
(THR222) (GLY231) E2
(SER243) (LEU249) E3
(ASP261) (TYR277) E4
(SER280) (LYS300) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -83.6° E2
E3 129.4° 125.0° E3
E4 -83.0° 8.2° 131.2° E4
E5 83.5° 160.2° -55.6° 164.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4poqj_ : (ASN219) (LYS300) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d1sva4_ : (ASN215) (LYS296) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Simian virus 40, Sv40 [TaxId: 10633]
d1sva3_ : (ASN215) (LYS296) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Simian virus 40, Sv40 [TaxId: 10633]
d4poqb_ : (LYS187) (LYS300) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4poqa_ : (ASN219) (LYS300) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d1cn3a_ : (VAL202) (LYS316) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d4posd_ : (ASN219) (LYS300) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4poqi_ : (ASN219) (LYS300) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d1sva5_ : (ASN215) (LYS292) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Simian virus 40, Sv40 [TaxId: 10633]
d4poqf_ : (ASN219) (LYS300) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d1sva1_ : (ASN215) (LYS296) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Simian virus 40, Sv40 [TaxId: 10633]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121