Tableau information
Concept source: d4jrkb_ amino acid (a.a.) range (GLN5)(ASN48)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN5) (ARG19) H1
(VAL22) (LEU26) E2
(ILE30) (GLY34) E3
(GLU37) (GLN41) E4
(PHE42) (ASN48) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -128.7° E2
E3 -55.4° 156.1° E3
E4 -166.7° 46.4° -123.0° E4
E5 19.9° -123.3° 68.8° -168.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3rera_ : (LEU7) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 511693]
d1u1sb_ : (HIS5) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4mmkd_ : (HIS5) (LYS47) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d1th7b_ : (GLU8) (ASP49) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Sulfolobus solfataricus [TaxId: 2287]
d4m75b_ : (MSE1) (ASN42) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3inza_ : (SER6) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d1kq1a_ : (ASN6) (ASN47) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Staphylococcus aureus [TaxId: 1280]
d3inzb_ : (HIS5) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3qsue_ : (ASN6) (ASN47) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Staphylococcus aureus [TaxId: 1280]
d1u1sa1 : (LEU7) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d1vu24_ : (HIS5000) (GLU5039) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3quib_ : (HIS5) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4c92d_ : (MET1) (ASN42) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3qo3a_ : (GLN5) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 511693]
d4j5ya_ : (LEU7) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3rerc_ : (GLN5) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 511693]
d3rerb_ : (LEU7) (ASN48) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 511693]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.38