Tableau information
Concept source: d4i5qb1 amino acid (a.a.) range (ALA3)(GLN48)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA3) (GLY13) H1
(THR17) (ALA21) E2
(GLY26) (THR32) E3
(GLY35) (THR40) E4
(LYS44) (GLN48) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 138.7° E2
E3 -40.0° 155.5° E3
E4 133.7° -45.0° 159.4° E4
E5 -66.1° 101.2° -54.4° 146.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4i5qb1 : (ALA3) (GLN48) [view usage] : d.17.3.0 |Cystatin-like |DsbC/DsbG N-terminal domain-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1eeja2 : (ALA3) (GLN48) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Disulfide bond isomerase, DsbC, N-terminal domain |Escherichia coli [TaxId: 562]
d1k3ba_ : (THR7) (ILE62) [view usage] : b.61.5.1 |Streptavidin-like |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Human (Homo sapiens) [TaxId: 9606]
d4npba1 : (SER24) (GLN69) [view usage] : d.17.3.0 |Cystatin-like |DsbC/DsbG N-terminal domain-like |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d1jzda2 : (ALA3) (GLN48) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Disulfide bond isomerase, DsbC, N-terminal domain |Escherichia coli [TaxId: 562]
d1hxna_ : (PRO268) (VAL310) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Hemopexin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1qksa2 : (PRO491) (ASP547) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus denitrificans [TaxId: 266]
d4cdfa_ : (THR7) (ILE62) [view usage] : b.61.5.1 |Streptavidin-like |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Human (Homo sapiens) [TaxId: 9606]
d1ftha_ : (ARG1046) (ASN1119) [view usage] : d.150.1.2 |4'-phosphopantetheinyl transferase |4'-phosphopantetheinyl transferase |Holo-(acyl carrier protein) synthase ACPS |Holo-(acyl carrier protein) synthase ACPS |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2djfa_ : (THR7) (ILE62) [view usage] : b.61.5.1 |Streptavidin-like |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Human (Homo sapiens) [TaxId: 9606]
d2kf2a_ : (ASP24) (ARG82) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d2gu3a1 : (SER101) (PRO161) [view usage] : d.17.1.6 |Cystatin-like |Cystatin/monellin |PepSY-like |Uncharacterized protein YpmB |Bacillus subtilis [TaxId: 1423]
d2f8sa1 : (LEU35) (LYS81) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |automated matches |Aquifex aeolicus [TaxId: 63363]
d3cfij_ : (TYR33) (TYR108) [view usage] : d.24.1.7 |Pili subunits |Pili subunits |GSPII I/J protein-like |Pseudopilin EpsI |Vibrio vulnificus [TaxId: 672]
d2od0a1 : (ILE5) (ASP50) [view usage] : d.198.5.2 |Secretion chaperone-like |YgaC/TfoX-N like |TfoX N-terminal domain-like |Hypothetical protein VP1028 |Vibrio parahaemolyticus [TaxId: 670]
d1hzua2 : (PRO467) (PRO524) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d4n6ta_ : (SER34) (GLU106) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Artificial gene [TaxId: 32630]
d1t3ba2 : (ASP2) (GLY49) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Disulfide bond isomerase, DsbC, N-terminal domain |Haemophilus influenzae [TaxId: 727]
d4i5qa1 : (GLU-1) (GLN48) [view usage] : d.17.3.0 |Cystatin-like |DsbC/DsbG N-terminal domain-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d2gu3a2 : (HIS38) (GLU95) [view usage] : d.17.1.6 |Cystatin-like |Cystatin/monellin |PepSY-like |Uncharacterized protein YpmB |Bacillus subtilis [TaxId: 1423]
d3db7a_ : (ALA97) (ASN145) [view usage] : d.98.2.1 |BLIP-like |BT0923-like |BT0923-like |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d2od0b_ : (LEU6) (ASP50) [view usage] : d.198.5.2 |Secretion chaperone-like |YgaC/TfoX-N like |TfoX N-terminal domain-like |Hypothetical protein VP1028 |Vibrio parahaemolyticus [TaxId: 670]
d1o12a2 : (ILE257) (PHE294) [view usage] : c.1.9.10 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain |N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, c.1, d.129, d.17, d.98, b.34, d.150, b.61, d.24, b.66, d.198