Protein Concepts Dictionary

Tableau information

Concept source:  d1tiid_  amino acid (a.a.) range (SER3)(ILE49)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER3)   (ARG12) H1
	   (SER16)   (GLY20) E2
	   (GLY20)   (ILE30) E3
	   (GLY36)   (SER42) E4
	   (GLY45)   (ILE49) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2      157.7°   E2                          
E3       58.3° -112.2°   E3                   
E4     -123.0°   53.4°  149.4°   E4            
E5       84.2° -107.7°  -56.1°  148.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ohjb1 :    (ASP44)   (SER89)   [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |automated matches |Staphylococcus aureus [TaxId: 1280]
 d4fp5d_ :     (SER3)   (ILE49)   [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |automated matches |Escherichia coli [TaxId: 562]
 d3cpjg1 :   (GLY238)  (PRO288)   [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1efpa1 :    (MET99)  (LYS137)   [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
 d4fnfa_ :     (SER3)   (ARG48)   [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |automated matches |Escherichia coli [TaxId: 562]
 d4fo2a_ :     (SER3)   (ILE49)   [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |automated matches |Escherichia coli [TaxId: 562]
 d2a1tr1 :   (LEU120)  (LYS158)   [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1usyd_ :     (LEU4)   (SER49)   [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |ATP phosphoribosyltransferase regulatory subunit HisZ |Thermotoga maritima [TaxId: 2336]
 d1ukvg1 :   (GLY238)  (PRO288)   [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |Guanine nucleotide dissociation inhibitor, GDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1qb5d_ :     (SER3)   (ILE49)   [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Heat-labile toxin |Escherichia coli, type IIB [TaxId: 562]
 d3cu7af :  (SER1544) (LYS1602)   [view usage] : b.40.3.3 |OB-fold |TIMP-like |Netrin-like domain (NTR/C345C module) |Complement C5 domain |Human (Homo sapiens) [TaxId: 9606]
 d1usyc_ :     (PHE6)   (GLU52)   [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |ATP phosphoribosyltransferase regulatory subunit HisZ |Thermotoga maritima [TaxId: 2336]
 d3c49a2 :   (ASN419)  (HIS474)   [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4l0pb_ :    (ASN82)  (PRO131)   [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1tiid_ :     (SER3)   (ILE49)   [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Heat-labile toxin |Escherichia coli, type IIB [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26,    b.40,   d.104,   d.166,     b.6,     c.3