Protein Concepts Dictionary

Tableau information

Concept source:  d3llba_  amino acid (a.a.) range (THR37)(PRO80)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR37)   (PHE46) H1
	   (GLU54)   (GLY59) E2
	   (PHE61)   (VAL65) E3
	   (LEU66)   (SER70) E4
	   (HIS74)   (PRO80) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2      105.3°   E2                          
E3      -87.1°  160.1°   E3                   
E4      -79.1°  116.8°  -49.4°   E4            
E5       79.7°  -48.5°  151.1° -148.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3llba_ :    (THR37)   (PRO80)   [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2plsa1 :   (THR383)  (LYS426)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein CT0541 |Chlorobium tepidum [TaxId: 1097]
 d2plia1 :    (THR43)   (ARG86)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Uncharacterized protein NMB0537 |Neisseria meningitidis [TaxId: 487]
 d2plic_ :    (THR43)   (ARG86)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Uncharacterized protein NMB0537 |Neisseria meningitidis [TaxId: 487]
 d2plsd_ :   (THR383)  (LYS426)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein CT0541 |Chlorobium tepidum [TaxId: 1097]
 d1nc7b_ :    (ARG67)  (GLU114)   [view usage] : b.123.1.1 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |Thermotoga maritima [TaxId: 2336]
 d2gbca1 :    (GLU89)  (ASP134)   [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3qq7a2 :   (LEU130)  (GLU185)   [view usage] : d.31.1.1 |Cdc48 domain 2-like |Cdc48 domain 2-like |Cdc48 domain 2-like |Membrane fusion atpase p97 domain 2, P97-Nc |Human (Homo sapiens) [TaxId: 9606]
 d2rk5a1 :    (THR38)   (VAL87)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Putative hemolysin SMU1693 |Streptococcus mutans [TaxId: 1309]
 d2plib_ :    (THR43)   (ARG86)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Uncharacterized protein NMB0537 |Neisseria meningitidis [TaxId: 487]
 d3dedc_ :   (THR382)  (ARG425)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Probable hemolysin CV0231 |Chromobacterium violaceum [TaxId: 536]
 d3qq8a2 :   (LEU130)  (GLY186)   [view usage] : d.31.1.1 |Cdc48 domain 2-like |Cdc48 domain 2-like |Cdc48 domain 2-like |Membrane fusion atpase p97 domain 2, P97-Nc |Human (Homo sapiens) [TaxId: 9606]
 d3deda1 :   (THR382)  (ARG425)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Probable hemolysin CV0231 |Chromobacterium violaceum [TaxId: 536]
 d2o3ga1 :   (THR210)  (LYS253)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Putative protein NMB1485 |Neisseria meningitidis [TaxId: 487]
 d2nqwa1 :    (THR45)   (PHE87)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein PG0272 |Porphyromonas gingivalis [TaxId: 837]
 d3dedb_ :   (THR382)  (ARG425)   [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Probable hemolysin CV0231 |Chromobacterium violaceum [TaxId: 536]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.70,   d.145,   b.123,    d.31