Protein Concepts Dictionary

Tableau information

Concept source:  d4gqsa_  amino acid (a.a.) range (GLU438)(PRO489)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU438)  (ASN455) H1
	  (ASN457)  (LEU461) E2
	  (THR469)  (GLY475) E3
	  (ALA477)  (PRO481) E4
	  (TYR483)  (PRO489) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
E2       84.9°   E2                          
E3      151.1°   76.7°   E3                   
E4      -13.2°  -72.1°  143.6°   E4            
E5       61.7°  144.4° -127.3°   74.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1og2a_ :   (GLU438)  (PRO489)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
 d2pg6b_ :   (CYS439)  (PRO493)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gqsc_ :   (GLY437)  (PRO489)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gqsa_ :   (GLU438)  (PRO489)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pq2a_ :   (GLY437)  (VAL490)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c8 |Human (Homo sapiens) [TaxId: 9606]
 d1isua_ :     (ALA4)   (ASP56)   [view usage] : g.35.1.1 |HIPIP (high potential iron protein) |HIPIP (high potential iron protein) |HIPIP (high potential iron protein) |HIPIP (high potential iron protein) |Rhodocyclus tenuis [TaxId: 1066]
 d2d7ja_ :    (CYS79)  (GLU134)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Pyrococcus horikoshii [TaxId: 70601]
 d1n6ba_ :   (PHE445)  (PRO486)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c5 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1og5a_ :   (GLU438)  (PRO489)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
 d2vn0a_ :   (GLY437)  (PRO489)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c8 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104,    c.23,    g.35