Tableau information
Concept source: d3h8ja1 amino acid (a.a.) range (GLU13)(ASP71)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU13) (ASP19) E1
(PHE20) (ASN31) H2
(LEU40) (LEU46) H3
(LEU48) (GLY62) H4
(LYS65) (ASP71) E5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 44.7° H2
H3 139.1° 120.4° H3
H4 145.8° 132.4° 12.1° H4
E5 -20.0° -64.7° 137.4° 138.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nz2a_ : (HIS184) (ASP262) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
d1u81a_ : (ALA119) (ALA157) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF1 [TaxId: 9606]
d1kbla1 : (GLY558) (TYR618) [view usage] : c.1.12.2 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Pyruvate phosphate dikinase, C-terminal domain |Pyruvate phosphate dikinase, C-terminal domain |Clostridium symbiosum [TaxId: 1512]
d1q2ra_ : (ASP65) (SER103) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d1xkna_ : (GLY166) (GLY206) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Chlorobium tepidum [TaxId: 1097]
d3ea1a_ : (ILE28) (ASP74) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |automated matches |Bacillus thuringiensis [TaxId: 1428]
d1ocja_ : (HIS262) (ASN307) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
d1euva_ : (ASN467) (ASN511) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Ulp1 protease C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ko7a1 : (ILE50) (THR87) [view usage] : c.98.2.1 |MurF and HprK N-domain-like |HprK N-terminal domain-like |HPr kinase/phoshatase HprK N-terminal domain |HPr kinase/phoshatase HprK N-terminal domain |Staphylococcus xylosus [TaxId: 1288]
d1d0ih_ : (ILE9) (GLN55) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d1d0ie_ : (ILE9) (GLN55) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d3h53a1 : (ALA184) (TYR215) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gz1a_ : (HIS262) (ASN307) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
d2c8jb_ : (LYS2) (LYS86) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |automated matches |Bacillus anthracis [TaxId: 198094]
d1ktba2 : (VAL168) (TYR199) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Chicken (Gallus gallus) [TaxId: 9031]
d5ptda_ : (ILE28) (ASP74) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |Phosphatidylinositol-specific phospholipase C |Bacillus cereus [TaxId: 1396]
d1gyma_ : (ILE28) (ASP74) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |Phosphatidylinositol-specific phospholipase C |Bacillus cereus [TaxId: 1396]
d3orya1 : (LYS26) (ASP84) [view usage] : c.120.1.0 |PIN domain-like |PIN domain-like |automated matches |automated matches |Desulfurococcus amylolyticus [TaxId: 94694]
d3h8ja1 : (GLU13) (ASP71) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |T4 RNase H |Bacteriophage T4 [TaxId: 10665]
d6ptda_ : (ILE28) (ASP74) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |Phosphatidylinositol-specific phospholipase C |Bacillus cereus [TaxId: 1396]
d3dc0a1 : (ASP171) (GLY207) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus sp. [TaxId: 535911]
d1u02a_ : (SER2) (GLY46) [view usage] : c.108.1.15 |HAD-like |HAD-like |Trehalose-phosphatase |Trehalose-6-phosphate phosphatase related protein |Thermoplasma acidophilum [TaxId: 2303]
d2jcsa_ : (CYS48) (GLU104) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2c8ja_ : (MET1) (LYS86) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |automated matches |Bacillus anthracis [TaxId: 198094]
d1vbga1 : (GLY561) (LEU622) [view usage] : c.1.12.2 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Pyruvate phosphate dikinase, C-terminal domain |Pyruvate phosphate dikinase, C-terminal domain |Maize (Zea mays) [TaxId: 4577]
d1sg2c_ : (LYS15) (ASP130) [view usage] : f.48.1.1 |OmpH-like |OmpH-like |OmpH-like |Periplasmic chaperon skp (HlpA) |Escherichia coli [TaxId: 562]
d3n7ta_ : (THR163) (PRO203) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Fungus (Coccidioides immitis) [TaxId: 5501]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, c.6, c.108, c.92, c.23, c.37, d.3, d.126, c.120, c.98, f.48