Tableau information
Concept source: d1q85a1 amino acid (a.a.) range (ASN501)(GLU556)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN501) (GLY505) E1
(GLY505) (PHE511) H2
(ARG516) (GLY531) H3
(SER533) (MSE537) E4
(ASP541) (GLU556) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 40.1° H2
H3 169.2° 133.7° H3
E4 -16.3° -55.9° 168.7° E4
H5 159.2° 120.6° -22.6° -166.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2c7fa2 : (PRO64) (GLY131) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Clostridium thermocellum [TaxId: 1515]
d3rrma1 : (LYS234) (ILE285) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3pewa1 : (LYS234) (VAL286) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ea9c3 : (ASP320) (GLU364) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
d3thaa_ : (ALA87) (TYR137) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2iw0a1 : (ASN167) (VAL214) [view usage] : c.6.2.3 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |NodB-like polysaccharide deacetylase |Chitin deacetylase |Bean anthracnose fungus (Colletotrichum lindemuthianum) [TaxId: 290576]
d4o0mb1 : (THR141) (SER202) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3dc7b_ : (ASP84) (TYR173) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |automated matches |Lactobacillus plantarum [TaxId: 1590]
d1qhoa4 : (GLY278) (SER353) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
d1nvmc2 : (LYS7) (ILE80) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain |Pseudomonas sp. [TaxId: 306]
d1eyya_ : (ASN258) (GLN317) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Vibrio harveyi [TaxId: 669]
d4bi5a_ : (ILE209) (LEU252) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Giardia intestinalis [TaxId: 5741]
d3s9yb_ : (TYR260) (GLU322) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d1ua4a_ : (GLN227) (VAL282) [view usage] : c.72.1.3 |Ribokinase-like |Ribokinase-like |ADP-specific Phosphofructokinase/Glucokinase |ADP-dependent glucokinase |Pyrococcus furiosus [TaxId: 2261]
d2hrua1 : (TYR62) (ALA123) [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 |Thermotoga maritima [TaxId: 2336]
d1bf2a3 : (ASN501) (ALA628) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isoamylase, central domain |Pseudomonas amyloderamosa [TaxId: 32043]
d3dc0a1 : (LEU261) (VAL344) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus sp. [TaxId: 535911]
d1eyyb_ : (ASN258) (GLN317) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Vibrio harveyi [TaxId: 669]
d1baga2 : (LEU261) (ASN343) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus subtilis [TaxId: 1423]
d3dc7c_ : (ASP84) (TYR173) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |automated matches |Lactobacillus plantarum [TaxId: 1590]
d2aama1 : (LYS151) (PHE210) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d3n2ta_ : (ARG17) (LYS75) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Gluconobacter oxydans [TaxId: 442]
d1pjza_ : (ALA101) (VAL161) [view usage] : c.66.1.36 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Thiopurine S-methyltransferase |Thiopurine S-methyltransferase |Pseudomonas syringae [TaxId: 317]
d1sr9a2 : (LEU73) (GLY132) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |2-isopropylmalate synthase LeuA, catalytic domain |Mycobacterium tuberculosis [TaxId: 1773]
d3in1a_ : (LYS135) (SER188) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3h49a_ : (LYS135) (SER188) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1xu4a2 : (LYS206) (ALA282) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |DNA repair protein Rad51, catalytic domain |Methanococcus voltae [TaxId: 2188]
d3tuic1 : (LYS160) (ARG206) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3vgea2 : (ASP303) (SER407) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Glycosyltrehalose trehalohydrolase, central domain |Sulfolobus solfataricus, km1 [TaxId: 2287]
d2aamc_ : (LYS151) (PHE210) [view usage] : c.1.8.15 |TIM beta/alpha-barrel |(Trans)glycosidases |TM1410-like |Hypothetical protein TM1410 |Thermotoga maritima [TaxId: 2336]
d1ua7a2 : (LEU261) (VAL344) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus subtilis [TaxId: 1423]
d2qe7d2 : (VAL240) (ALA316) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |automated matches |Bacillus sp. [TaxId: 90973]
d4lrsa1 : (PRO11) (SER63) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Thermomonospora curvata [TaxId: 471852]
d1ly1a_ : (GLY28) (TYR103) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Polynucleotide kinase, kinase domain |Bacteriophage T4 [TaxId: 10665]
d3sbfa2 : (ASP277) (HIS328) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Vibrionales bacterium [TaxId: 391574]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.6, c.82, c.66, c.72, c.23, c.37, d.79