Tableau information
Concept source: d3visb_ amino acid (a.a.) range (GLY91)(THR148)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY91) (PRO97) E1
(THR102) (ALA107) H2
(ALA107) (GLY117) H3
(VAL119) (ILE123) E4
(PRO132) (THR148) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 126.7° H2
H3 171.2° -44.5° H3
E4 -20.3° 145.8° 168.3° E4
H5 144.7° -70.6° -38.1° 139.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4k6hb_ : (LYS32) (GLU81) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d1lzka_ : (PRO80) (THR125) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Heroin esterase |Rhodococcus sp. [TaxId: 1831]
d1vlqa_ : (PRO84) (SER173) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |Acetyl xylan esterase TM0077 |Thermotoga maritima [TaxId: 2336]
d1x1ra1 : (PRO120) (GLN177) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ras-related protein M-Ras (XRas) |Mouse (Mus musculus) [TaxId: 10090]
d3eqza_ : (ASN3) (THR40) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Colwellia psychrerythraea [TaxId: 167879]
d1yoba1 : (GLY88) (LYS159) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Azotobacter vinelandii [TaxId: 354]
d3visb_ : (GLY91) (THR148) [view usage] : c.69.1.16 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Lipase |automated matches |Thermobifida alba [TaxId: 53522]
d3m81a_ : (PRO84) (SER173) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Thermotoga maritima [TaxId: 2336]
d1t3xa_ : (ARG73) (LYS131) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4nv0a_ : (SER260) (LEU311) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1qcza_ : (ARG9) (SER57) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Escherichia coli [TaxId: 562]
d3u5ca_ : (ARG119) (LEU184) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d4edpa_ : (LYS33) (ASN79) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium perfringens [TaxId: 195103]
d2puha_ : (GLU34) (LEU101) [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Burkholderia xenovorans [TaxId: 36873]
d3r5xa2 : (SER-2) (ILE47) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1zvma_ : (GLN236) (ASN290) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Human (Homo sapiens) [TaxId: 9606]
d2d0od_ : (ILE10) (SER57) [view usage] : c.51.3.2 |Anticodon-binding domain-like |B12-dependent dehydatase associated subunit |Dehydratase-reactivating factor beta subunit |automated matches |Klebsiella oxytoca [TaxId: 571]
d1bmta2 : (PRO829) (LEU871) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methionine synthase, C-terminal domain |Escherichia coli [TaxId: 562]
d1jd7a2 : (THR3) (TYR50) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d3du7b1 : (ARG64) (HIS107) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
d1sgja_ : (ALA189) (GLU231) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Citrate lyase, beta subunit |Deinococcus radiodurans [TaxId: 1299]
d4i36a_ : (LYS2) (GLY47) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
d4k6gb_ : (LYS32) (GLU81) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d1z8hd_ : (ARG10) (ARG63) [view usage] : c.23.10.6 |Flavodoxin-like |SGNH hydrolase |Hypothetical protein alr1529 |Hypothetical protein alr1529 |Nostoc sp. PCC 7120 [TaxId: 103690]
d2ov1a_ : (GLU99) (ASP202) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Synechocystis sp. [TaxId: 1143]
d3bula2 : (ILE828) (LEU871) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methionine synthase, C-terminal domain |Escherichia coli [TaxId: 562]
d3dc7b_ : (ARG23) (ILE79) [view usage] : c.23.10.9 |Flavodoxin-like |SGNH hydrolase |BT2961-like |automated matches |Lactobacillus plantarum [TaxId: 1590]
d3e4dd_ : (PRO213) (PHE264) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d3m81e_ : (PRO84) (SER173) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Thermotoga maritima [TaxId: 2336]
d4ovrb_ : (TYR28) (GLY82) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d1jjia_ : (SER79) (LYS125) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Archaeoglobus fulgidus [TaxId: 2234]
d2qxya_ : (PRO5) (ARG46) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3cgwa_ : (ASP257) (ALA302) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |LPPG:FO 2-phospho-L-lactate transferase CofD |Methanosarcina mazei [TaxId: 2209]
d1o2da_ : (LYS29) (TYR82) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Alcohol dehydrogenase TM0920 |Thermotoga maritima [TaxId: 2336]
d4nv0b_ : (SER260) (ASN310) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1zcfa_ : (PRO5) (SER84) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |Pectobacterium atrosepticum [TaxId: 218491]
d3dc0a1 : (GLY9) (GLN63) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus sp. [TaxId: 535911]
d1baga2 : (GLY9) (GLN63) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus subtilis [TaxId: 1423]
d1e1ca2 : (LEU681) (ALA728) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methylmalonyl-CoA mutase alpha subunit, C-terminal domain |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d2jvja_ : (ARG77) (TYR118) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Sporulation response regulator Spo0F |Bacillus subtilis [TaxId: 1423]
d4k6ha_ : (LYS32) (GLU81) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d4i36b_ : (LYS2) (GLY47) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
d4nd9a_ : (THR140) (GLN190) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d1oqva_ : (LYS106) (GLY148) [view usage] : d.24.1.2 |Pili subunits |Pili subunits |TcpA-like pilin |Toxin-coregulated pilus subunit TcpA |Vibrio cholerae [TaxId: 666]
d4j2ha_ : (HIS36) (GLY86) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1kq3a_ : (GLU30) (VAL79) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Glycerol dehydrogenase |Thermotoga maritima [TaxId: 2336]
d1gkla_ : (ASN858) (GLN919) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Feruloyl esterase domain of the cellulosomal xylanase y |Clostridium thermocellum [TaxId: 1515]
d1ku0a_ : (PRO9) (VAL71) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase L1 |Bacillus stearothermophilus [TaxId: 1422]
d2cyga1 : (SER265) (PHE325) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
d1cbxa_ : (LEU201) (TYR248) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d2nwsa_ : (PHE1004) (ARG1049) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d4hpga_ : (GLU235) (PHE300) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d1imja_ : (PHE33) (ALA78) [view usage] : c.69.1.23 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Ccg1/TafII250-interacting factor B (Cib) |Ccg1/TafII250-interacting factor B (Cib) |Human (Homo sapiens) [TaxId: 9606]
d1dtda_ : (GLN556) (TYR604) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Human (Homo sapiens) [TaxId: 9606]
d4fsha1 : (LYS2) (GLY58) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1nbwb_ : (VAL8) (SER58) [view usage] : c.51.3.2 |Anticodon-binding domain-like |B12-dependent dehydatase associated subunit |Dehydratase-reactivating factor beta subunit |Glycerol dehydratase reactivase, beta subunit |Klebsiella pneumoniae [TaxId: 573]
d1nlia_ : (ASP78) (ALA117) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Trichosanthin |Mongolian snake gourd (Trichosanthes kirilowii Maxim.) [TaxId: 3677]
d1zxxa_ : (LYS2) (GLY47) [view usage] : c.89.1.0 |Phosphofructokinase |Phosphofructokinase |automated matches |automated matches |Lactobacillus delbrueckii [TaxId: 1585]
d4nwia_ : (SER260) (ASN310) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2b3xa2 : (CYS118) (GLU183) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Iron-responsive element binding protein 1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2jsya_ : (THR47) (ALA91) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1z8hb_ : (ARG10) (ARG63) [view usage] : c.23.10.6 |Flavodoxin-like |SGNH hydrolase |Hypothetical protein alr1529 |Hypothetical protein alr1529 |Nostoc sp. PCC 7120 [TaxId: 103690]
d2geba_ : (ASP37) (SER79) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Thermoanaerobacter tengcongensis [TaxId: 119072]
d2csua3 : (VAL406) (VAL451) [view usage] : c.23.4.1 |Flavodoxin-like |Succinyl-CoA synthetase domains |Succinyl-CoA synthetase domains |Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 |Pyrococcus horikoshii [TaxId: 53953]
d4i4ia_ : (LYS2) (GLY47) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.2, i.1, c.108, c.56, c.92, d.165, e.22, c.23, c.37, c.47, c.89, c.51, c.61, d.109, i.10, c.88, c.30,
c.58, c.83, d.24, c.143