Tableau information
Concept source: d3wu4e_ amino acid (a.a.) range (LYS732)(LEU769)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: EHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS732) (PRO737) E1
(LYS741) (ILE747) H2
(ASP749) (LEU755) H3
(ASP756) (LYS761) E4
(ILE763) (LEU769) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 136.6° H2
H3 -103.2° 120.1° H3
E4 -17.2° 151.7° 87.0° E4
H5 -171.5° -51.7° 68.4° 154.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2obxa_ : (TYR9) (THR68) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
d3e60a2 : (ASP306) (ASP366) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
d3l6ua_ : (SER134) (SER192) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
d4ddda_ : (LYS145) (ASN192) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d3grcb_ : (ALA623) (ASN668) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
d3wu3e_ : (LYS732) (LEU769) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d2obxd_ : (VAL12) (THR68) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
d3keba_ : (PRO48) (GLU100) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1tf7a1 : (GLY71) (LYS136) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Circadian clock protein KaiC |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d1rlka_ : (MET5) (GLY75) [view usage] : c.131.1.1 |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |Hypothetical protein TA0108 |Thermoplasma acidophilum [TaxId: 2303]
d4o0mb1 : (PRO71) (LYS137) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1sowa1 : (ASP92) (ALA152) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
d1u63a1 : (ASP103) (THR149) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Methanococcus jannaschii [TaxId: 2190]
d4jaxa2 : (ALA411) (GLY477) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Kluyveromyces lactis [TaxId: 284590]
d1i2aa_ : (ASP103) (LEU146) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Methanococcus jannaschii [TaxId: 2190]
d1dwua_ : (ASP103) (LEU146) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Methanococcus thermolithotrophicus [TaxId: 2186]
d4o1jb_ : (ILE40) (LYS92) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Sordaria macrospora [TaxId: 5147]
d2hsta_ : (GLY223) (SER271) [view usage] : c.55.4.2 |Ribonuclease H-like motif |Translational machinery components |ERF1/Dom34 middle domain-like |Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1 |Human (Homo sapiens) [TaxId: 9606]
d2gfya2 : (GLY298) (ASP359) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1tf7a2 : (ARG311) (PHE370) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Circadian clock protein KaiC |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d1q7sa_ : (GLY63) (GLY137) [view usage] : c.131.1.1 |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |Bit1 (Cgi-147) |Human (Homo sapiens) [TaxId: 9606]
d4ai5a_ : (LYS123) (LYS182) [view usage] : a.96.1.0 |DNA-glycosylase |DNA-glycosylase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282459]
d3l5ka_ : (PRO108) (VAL145) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jgaa2 : (ASP313) (GLN375) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Rickettsia rickettsii [TaxId: 392021]
d1mzpa_ : (GLU108) (SER154) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Sulfolobus acidocaldarius [TaxId: 2285]
d2obxf_ : (VAL12) (THR68) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
d1us5a_ : (ARG133) (LYS179) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative GluR0 ligand binding core |Thermus thermophilus [TaxId: 274]
d3wu6e_ : (LYS732) (LEU769) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d3teoh_ : (ARG29) (GLY79) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Acidianus sp. [TaxId: 1071056]
d1w0ia2 : (ASP345) (GLY409) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase II |Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
d3a5wb_ : (LYS168) (GLY203) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
d3pzlb_ : (LYS36) (GLY114) [view usage] : c.42.1.0 |Arginase/deacetylase |Arginase/deacetylase |automated matches |automated matches |Thermoplasma volcanium [TaxId: 273116]
d1dapa2 : (HIS193) (SER237) [view usage] : d.81.1.3 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Dihydrodipicolinate reductase-like |Diaminopimelic acid dehydrogenase (DAPDH) |Corynebacterium glutamicum [TaxId: 1718]
d3kzua2 : (ASP306) (ASP366) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
d3wu4e_ : (LYS732) (LEU769) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d1h65a_ : (LYS156) (ASN245) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Chloroplast protein translocon GTPase Toc34 |Pea (Pisum sativum) [TaxId: 3888]
d4o1ja_ : (ILE40) (LYS92) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Sordaria macrospora [TaxId: 5147]
d1us4a_ : (ARG133) (LYS179) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative GluR0 ligand binding core |Thermus thermophilus [TaxId: 274]
d1r1ra2 : (ILE459) (GLY528) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
d1cjsa_ : (ASP103) (LEU146) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Methanococcus jannaschii [TaxId: 2190]
d1h65b_ : (LYS156) (ASN245) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Chloroplast protein translocon GTPase Toc34 |Pea (Pisum sativum) [TaxId: 3888]
d4ig6a_ : (SER0) (ALA42) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.2, c.108, c.93, c.42, c.23, c.37, c.7, c.47, c.55, c.95, d.14, d.81, a.96, c.53, c.116, c.16, e.24, c.131