Protein Concepts Dictionary

Tableau information

Concept source:  d2flib_  amino acid (a.a.) range (THR3)(PHE48)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR3)    (SER9) E1
	    (SER9)   (ASP14) H2
	   (PHE18)   (GLU27) H3
	   (VAL33)   (ASP39) E4
	   (PRO44)   (PHE48) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2       41.8°   H2                          
H3      157.0°  120.0°   H3                   
E4      -47.0°  -88.5°  143.2°   E4            
E5      101.0°   78.6°  -84.9° -126.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nu7d_ :     (PRO7)   (PHE51)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
 d2flia1 :     (THR3)   (PHE48)   [view usage] : c.1.2.2 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |D-ribulose-5-phosphate 3-epimerase |D-ribulose-5-phosphate 3-epimerase |Streptococcus pyogenes [TaxId: 1314]
 d2flig_ :     (THR3)   (PHE48)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
 d4nu7c_ :     (PRO7)   (PHE51)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
 d2or2a_ :    (ILE28)   (LEU80)   [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |automated matches |Bacillus thuringiensis [TaxId: 1428]
 d2flie_ :     (THR3)   (PHE48)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
 d2flib_ :     (THR3)   (PHE48)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
 d1h1ya_ :     (ALA5)   (ILE50)   [view usage] : c.1.2.2 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |D-ribulose-5-phosphate 3-epimerase |D-ribulose-5-phosphate 3-epimerase |Rice (Oryza sativa) [TaxId: 4530]
 d1tqxa_ :     (ALA6)   (PHE50)   [view usage] : c.1.2.2 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |D-ribulose-5-phosphate 3-epimerase |D-ribulose-5-phosphate 3-epimerase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d4nu7a_ :     (PRO7)   (PHE51)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1