Protein Concepts Dictionary

Tableau information

Concept source:  d2agoa2  amino acid (a.a.) range (ILE2)(TYR48)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE2)    (PHE8) E1
	   (PHE11)   (ASN20) H2
	   (ASN20)   (LYS26) H3
	   (LYS26)   (VAL32) E4
	   (ALA44)   (TYR48) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2       58.1°   H2                          
H3      101.4° -128.0°   H3                   
E4       93.6°  120.0° -107.5°   E4            
E5     -100.1°  -73.3°  -63.6° -164.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jeia2 :     (ILE2)   (TYR48)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d2j6ua2 :     (ILE5)   (TYR51)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d1jxla2 :     (ILE2)   (TYR48)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d3pr4a1 :     (ILE2)   (TYR48)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d2asda2 :     (GLY1)   (THR45)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d2agoa2 :     (ILE2)   (TYR48)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d2jefa2 :     (ILE2)   (TYR48)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d1jx4a2 :     (ILE2)   (TYR48)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8