Protein Concepts Dictionary

Tableau information

Concept source:  d1bhmb_  amino acid (a.a.) range (GLU4)(THR50)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU4)    (THR9) E1
	    (THR9)   (ASP19) H2
	   (LYS20)   (SER35) H3
	   (SER35)   (PRO39) E4
	   (THR44)   (THR50) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2       97.7°   H2                          
H3      152.1° -106.8°   H3                   
E4      147.5° -109.3°   -5.1°   E4            
E5      107.3° -154.2°   47.4°   45.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bhmb_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d1esgb_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bhma_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d2bamb_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d2bama_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d1esga_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d3bama_ :     (GLU4)   (THR50)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.52