Protein Concepts Dictionary

Tableau information

Concept source:  d1dlua2  amino acid (a.a.) range (ASP311)(GLU390)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: EHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP311)  (ASN316) E1
	  (PHE319)  (GLY331) H2
	  (SER353)  (ARG367) H3
	  (ARG371)  (GLY381) E4
	  (GLY382)  (GLU390) E5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                 
H2      149.9°   H2                          
H3      157.6°  -51.3°   H3                   
E4      -19.1°  131.3°  165.2°   E4            
E5      150.7°  -56.5°  -25.5°  167.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2c7ya2 :   (ASP356)  (GLU437)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2ebda2 :   (SER231)  (LEU306)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d4n45a2 :   (ASP311)  (GLU390)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 863638]
 d1zowa2 :   (ASP233)  (THR308)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
 d1ulqa2 :   (GLY317)  (GLU398)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoadipyl CoA thiolase |Thermus thermophilus [TaxId: 274]
 d1dlua2 :   (ASP311)  (GLU390)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Biosynthetic thiolase |Zoogloea ramigera [TaxId: 350]
 d1afwa2 :   (ASP338)  (GLU417)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Thiolase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1jdea3 :   (GLY270)  (ASN338)   [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
 d2wkta2 :   (ASP311)  (SER391)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Zoogloea ramigera [TaxId: 350]
 d4e1la2 :   (ASP312)  (ARG392)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d3ss6a2 :   (ASP310)  (LEU391)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3gwaa2 :   (ASP266)  (LEU341)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d2wl5a2 :   (ASP311)  (GLU390)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Zoogloea ramigera [TaxId: 350]
 d4n44a2 :   (ASP311)  (GLU390)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 863638]
 d4nhda2 :   (ASP238)  (LEU313)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d2c7yb2 :   (ASP356)  (GLY441)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4ubub2 :   (ASP310)  (ILE391)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95,   d.142